Yersinia entomophaga: PL78_10735
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Entry
PL78_10735 CDS
T09771
Name
(GenBank) regulatory protein CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
yeg
Yersinia entomophaga
Brite
KEGG Orthology (KO) [BR:
yeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yeg03019
]
PL78_10735
Messenger RNA biogenesis [BR:
yeg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PL78_10735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES4
GGDEF
Claudin_2
Motif
Other DBs
NCBI-ProteinID:
ANI30299
LinkDB
All DBs
Position
complement(2349715..2351631)
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AA seq
638 aa
AA seq
DB search
MRFTTKLSAFMALLVVLAMCLMLLGSTFSFFYLCQKKMEHRLNTIVTAYDQSLLTDPPEV
PRSWLPLMMGAIGVVEISVENSQHQLFYLKVLPTYTAWDTNSGYRELSLPLLQQPGSSMR
LTYIDPLTSYTRSMYAAVILSLAVAMIAVILFLSFRWLREQTAGEEQLENRARRILNGER
ENVLRGETHEWPPYASHALDRLLLDLAEMREERSQLDTLIRSYAAQDAKTGLNNALFFDN
QLTTQLEEPGAHGVVMMVHLPDFDALSEVYDKSRVQELMHSMVNLLSTFVDRYPSALLAH
YANSDFAILLPHKTLKDADVMAAQLVHVAGAMPAPQIIDRDALLNIGIVAYRHGQAAEQI
MDNAGQATKNAALYGGNSWYVYDNQVPEKGRGSVKWRTLLEKTLVNGGPRLYQKPVITCD
GKIHHREIISRIFDGEQELIAAEFTPLVRLLGLAERYDRQKIGRIIPLLALWPDETLAFS
ISVDSLLQRSFKRWLRDTLLQCRKSYRQRIIFELAEADVCQHIEALRPVIRLLLGLGCRL
MVSQAGLTVVSTSYIKSLRVEMIKLHPGLVRSIDVRLENQLFVQSLTGACAGTNVKVFAA
EVVTREEWETLLQKGVYGGQGNFFAAPMLLNPEQKKYS
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgcgatttacaaccaaactttctgcgtttatggcattactggtcgtattggccatgtgt
ttaatgttgttagggagtacgttcagttttttctacttatgccagaaaaaaatggaacat
cgccttaatactatcgtgaccgcgtacgatcaatccttactaaccgatccacctgaagtt
ccgcgtagctggttgccgttgatgatgggcgctattggcgtggttgaaatcagcgttgaa
aattcgcagcatcaattgttttatctgaaagtccttcctacttataccgcctgggatacc
aatagcggctatcgcgaactgtctcttccattattacagcagcccggcagttcgatgcgc
ctgacttatatcgatccgctcaccagttacactcgttcaatgtatgcagcggtgattttg
tcgttggcggtggcgatgattgcggtcattctgtttttaagttttcgctggctgcgggaa
caaacggcaggtgaggagcaactggagaaccgagcgcgacgtattctcaacggcgagcgt
gagaatgtactgcgcggtgaaactcatgagtggccgccttatgccagccatgctctcgac
cgtttgctgctggatttggcggaaatgcgtgaagaacgcagccaattggatactttgatt
cgctcctatgccgcacaggacgctaaaaccggcctgaataacgcgctgttttttgataat
cagctgactacccagcttgaagaacccggtgcccacggcgtagtgatgatggtgcactta
cccgattttgatgcgttaagtgaggtttacgacaaatcacgggtgcaggaattgatgcat
tcgatggtgaatctgctttccacttttgtcgaccgttatccttccgcactgctagctcac
tacgccaacagcgattttgccattttattaccgcataaaactctgaaagacgccgatgtg
atggcggcacagttggttcatgtggcgggtgccatgccagcgccgcagattatcgatcgc
gacgctttgctcaatattggtatcgtggcctatcgccacgggcaggcggcggaacaaatt
atggataatgctggacaagctaccaaaaatgcggcgttgtatggaggcaatagctggtat
gtctatgacaatcaggtgccggagaaaggacgcggtagcgttaagtggcgaacattgctg
gaaaaaacgctggttaacggtggccctaggttgtatcagaaaccggtcattacctgtgat
ggaaaaattcatcaccgtgaaatcatcagccggatatttgatggcgaacaagagctgata
gcggcggagtttactccgttggtacgtttgctcgggttggccgaacgttatgatcgacag
aaaataggtcggataattcctttgttggcgctgtggccggatgaaacgctggcattttcc
ataagcgttgattcattattgcaacgttcctttaagcgttggctacgggataccttatta
cagtgccggaaaagttaccgtcagcggattatctttgagctggctgaggcggatgtctgc
caacatattgaggccctacgccctgtgattcgattgttgttagggttaggttgtagattg
atggtttcgcaggccggattgacggtggtcagtacctcatatattaagtctttacgggtg
gaaatgattaagttacatccgggattggtaagaagtattgatgtccgccttgaaaatcag
ctatttgtgcaaagtcttactggtgcctgtgccggtacgaatgttaaagtttttgccgca
gaagtggtgaccagggaagaatgggaaacgctgctacagaaaggggtttatggcggacag
ggcaatttttttgctgcgccgatgcttttgaacccagagcagaaaaaatattcgtaa
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