Yersinia entomophaga: PL78_11970
Help
Entry
PL78_11970 CDS
T09771
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
yeg
Yersinia entomophaga
Brite
KEGG Orthology (KO) [BR:
yeg00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
PL78_11970
Enzymes [BR:
yeg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
PL78_11970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
Motif
Other DBs
NCBI-ProteinID:
ANI30539
LinkDB
All DBs
Position
complement(2617349..2619316)
Genome browser
AA seq
655 aa
AA seq
DB search
MATVSGVALVTICIFIVIQLFHFVQQRKDDYAKQLESIAYSVKNPLSSAILSVDIPGAKR
VLESTLPIGILSRADVVLPNELQVLHANFKPEQPVPNWVNRVFNLPVQITVPLYSLERVP
ANPKPLAYLVLQADSYRIYQFILNTLSTMLSTYLLLALILSVSITWCINRLIVHPLRSMA
RELENISQDQVLDHQLSMPARHLDDELGVLARNYNRNQHLLAKAYAEMSRISSRHPVTEL
PNRTLFLAMLNEHIDSPVRPEKFHLLVIGIETLHEASGVMTEHQHEQLLLTIVQELEQCI
DQNCLLGHLSKTEFAVMAKEISRPFPAMQLARRIMAQITAPLTFENMQLRPKASIGIVQY
LNQHESAEDLMRSASSAMVAAHHKGKNQILYYEEHLSEKTQKHLTYENDILRAIEKRDFI
LHLQPQWDMRNEKVIGAEALLRWNQADGTYLSPVDFLPLVEEKGIMVPLGNWVLEESCRI
LADWQRQGIKLPLAVNISGLQVQHETFLPHLKTILSHYKIDASQLMLEITETARIPDLDE
ALLLLRELHELGVSIAMDDFGMGYSSLHYLNRLKCLPIDMIKIDKSFVHTLPQDDAMARI
IGSISNVLKLRVMAEGVENEAQRQWLLDHGVTSGQGFLFSRPVPREEFEASFLPR
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggtgtccggtgtggcgctggtgacgatttgtatctttattgtcattcaactg
ttccattttgtgcagcagcgcaaagatgactacgccaagcagttggagagtatcgcgtat
tccgttaaaaaccccctttcttcggccatactcagcgtcgatattccaggtgctaaacgt
gtgctggagagcacattgccgattgggattttgagtcgggcagatgtggtgttgcctaat
gagctacaggtattacacgctaattttaagccagagcagccggtacccaattgggttaac
cgggtatttaatctgccggtgcaaattaccgttccgctctattcattagaaagagtcccc
gccaaccctaagcccctggcttatctggtgttacaggctgattcttaccgtatttatcaa
tttattcttaataccttatccaccatgctttcaacctatctgttgttagcattgattctt
tccgtttcaattacatggtgtattaaccggttaatcgtgcatccattgcgctcaatggct
cgtgaactggagaatatctctcaggatcaggtgttagatcatcagctttccatgcccgct
cgtcatcttgatgatgaattaggggtattggcgcgaaattataatcgtaaccagcatttg
ttagcgaaagcctatgcggaaatgagccgtatcagcagccgccacccggtgactgaattg
ccgaatcgcacgctgtttttagccatgttgaatgagcacattgattcccctgttcgacca
gaaaaatttcacctcttggttattggcatagaaacgctgcatgaagcgtccggcgtcatg
acggaacatcagcatgagcagctgttgctgaccatagtgcaggagcttgagcagtgcatt
gaccagaactgcttgctgggccatttgagtaaaaccgagtttgccgtcatggcaaaagag
atatcgcgacctttcccggcgatgcagcttgcccggcggattatggcgcagattaccgct
cctctgacctttgaaaacatgcagttgcgtccgaaagccagtattggcatcgtgcaatat
cttaatcagcatgaaagcgctgaagatttaatgcgcagtgctagctctgccatggtggca
gcccaccataagggtaaaaatcagattctctattacgaagagcatttgtcggaaaaaacg
caaaagcatctgacttacgaaaatgacattcttcgagccattgagaaacgtgattttata
ttgcacctacagccgcagtgggacatgcgtaatgaaaaagtcataggcgcggaggcgttg
ctgcgctggaatcaggccgatggtacttacctctcgccggtggattttcttccgctggtg
gaagaaaaaggcattatggtgccgctgggtaattgggtattggaagagtcctgccggata
ctggcagactggcagcgacaaggcattaaattgcccttggcggtgaatatttccggtttg
caggtgcagcatgagacgtttttaccgcacctcaaaactatcctcagtcattacaaaatt
gatgccagccagttaatgctggaaatcaccgaaactgcccgtattcccgatctggatgag
gcgttgctactgttgcgtgagctgcatgaactcggcgtttccatcgcaatggatgatttc
ggtatgggttattccagcctgcattatctcaatcgcctaaaatgtctgcccatcgacatg
attaagatcgataaaagtttcgtccacacgctaccgcaggatgatgcgatggcgcgaatt
atcggcagtatctccaatgtgctcaaactgcgcgtgatggccgaaggcgtagaaaatgaa
gctcagcgtcaatggttgttagaccacggtgtgacgagcgggcagggtttcctgttctcc
cgtccggtgccgcgcgaagagtttgaggccagtttcctgccacgttga
DBGET
integrated database retrieval system
