Yersinia entomophaga: PL78_13110
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Entry
PL78_13110 CDS
T09771
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
yeg
Yersinia entomophaga
Brite
KEGG Orthology (KO) [BR:
yeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yeg03016
]
PL78_13110 (truB)
Enzymes [BR:
yeg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PL78_13110 (truB)
Transfer RNA biogenesis [BR:
yeg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PL78_13110 (truB)
Prokaryotic type
PL78_13110 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
FoP_duplication
Motif
Other DBs
NCBI-ProteinID:
ANI30756
LinkDB
All DBs
Position
2881998..2882942
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AA seq
314 aa
AA seq
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MGRPRRRGRDINGVLLLDKPLGLSSNDVLQKVKRLFSANRAGHTGALDPLATGMLPICLG
EATKFSQFLLDSDKRYRVIARLGQRTDTSDAEGALISERDVNFTQEQLDAALDSFRGDTQ
QVPSMYSALKHQGKPLYEYARQGIEVEREARDITVYELQFIRWEGYELELEIHCSKGTYI
RTIIDDLGEMLGCGAHVSYLRRLQVATYPSDRMVTLEQLSAMVETAQAEERSPNPELDKL
LLPMDSAVLNFPEVNLLPIVAAYVKQGQPVQVAGAPTEGMVRMTEGEERNFIGIGIIADD
GRVAPKRLVVEHVE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgaccacgtcgtcgtggccgtgacattaacggtgttctgttattggacaaaccg
ttaggcctctcatcaaatgacgttttgcagaaagtgaagcgtcttttcagtgctaaccgt
gcaggtcataccggtgcattggacccattagctaccggtatgctgcctatctgtctgggc
gaagcgaccaagttttctcaattcctgctggattctgataaacgctaccgcgtgattgcc
cgtctgggccaacgtaccgatacctctgatgcagagggtgcgttgattagcgagcgtgac
gtcaatttcactcaggaacagctggacgccgcgttggatagtttccgcggtgacacccag
caagtgccttccatgtattctgcgctgaaacatcagggcaaaccgctgtacgagtatgct
cgtcagggaatcgaagtggagcgagaagcccgtgatatcacggtctatgagctgcaattc
attcgttgggaaggttatgagctggagctggaaattcattgctcaaaaggtacctacatt
cgcaccatcattgatgatttgggcgaaatgttaggctgcggtgcccatgtcagctatctg
cgtcgtttgcaggttgcaacttatccgagcgatcggatggtgacactggagcaactaagc
gccatggttgaaacggctcaggccgaagagcgttcacctaacccggaactggataaactg
ttgctcccaatggatagcgcagtgttgaatttcccggaagtgaatttgctgccaatcgtt
gcagcttatgtgaaacagggtcaaccggttcaggtggcgggtgcgccaactgaaggcatg
gtccgcatgaccgaaggcgaagagcgcaatttcatcggcatcggtattattgctgatgat
ggcagagtcgcaccgaaacgtttggttgtggaacacgtagaatag
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