Yersinia entomophaga: PL78_15215
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Entry
PL78_15215 CDS
T09771
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
yeg
Yersinia entomophaga
Brite
KEGG Orthology (KO) [BR:
yeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yeg03009
]
PL78_15215
Enzymes [BR:
yeg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PL78_15215
Ribosome biogenesis [BR:
yeg03009
]
Prokaryotic type
rRNA helicases
PL78_15215
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
P-loop_SecA
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ANI31164
LinkDB
All DBs
Position
complement(3369485..3370798)
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AA seq
437 aa
AA seq
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MTVTNFSELDLDERLIDALRDKGYERPTAIQAAAIPPAMDGRDVLGSAPTGTGKTAAFLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADQARELAKHTQLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETIAAETRW
RKQTLLFSATLEGEAIREFAERILEEPVELEADPSRRERKKIQQWYYRADNIEHKTALLV
HLLKQPDVQKSIIFVRTREKVHQLVSWLREAGINAWFLEGEMVQAKRTEAVIRLSDGRVN
VLVATDVASRGLDIDDISHVFNFDLPLTADVYLHRIGRTGRAGRKGVAISLVEAHDHLLL
GRIGRYLKEPLKPRVIDELRPTSKEPSAKSTGKPSKKVLAKRKELKAANKEKTKVKVRHR
DAKNVGKRRKPKNKADA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaaccaatttttccgaactcgatctcgacgaacgcctcattgacgccctgcgc
gacaaaggctatgagcgccctaccgccattcaggctgcggctattccgccagctatggac
ggacgcgacgtattgggttcggctcccacaggtacgggcaaaactgccgcctttttgctg
ccagccttgcagcatctgctggattttccacgcaaaaaatccgggccaccgcgcatcctg
attctgacgccaacccgtgagctggcgatgcaagttgccgatcaggcccgagaactggcc
aaacacactcagttagacatcgcgaccatcaccggtggcgtggcctacatgaaccatgct
gaagtcttcagcgagaaccaggacatcgtggttgcgaccactggccgtttactgcagtac
atcaaagaagagaactttgactgccgtgcggtagaaaccctgattctggatgaagccgat
cgtatgctggacatgggctttgcgcaggatatcgaaactatcgccgcggaaactcgctgg
cgtaagcagacattactgttctcagccacgctggaaggcgaagcgattcgcgagtttgcc
gagcgtattctcgaagagccagtagagttggaagccgatccgtctcgccgcgagcgtaaa
aaaatccagcaatggtactatcgcgcagacaatatcgaacacaaaactgccctgttggtt
catttactgaaacagccggacgtgcagaaatccattatcttcgtgcgtacccgtgaaaag
gtgcaccaattggtgagctggctacgtgaagccggtattaacgcctggttcctcgaaggt
gaaatggttcaggccaagcgtaccgaagcggttattcgtttaagcgatggtcgcgtcaac
gtattggtagcaacggacgtggcgtctcgtggcctggatatcgacgatatcagtcatgta
tttaactttgacctaccgctcacagcggacgtctatctgcaccgcattggccgtaccggt
cgggctggtcgcaaaggcgtggcgatttctttggttgaagcacatgatcatttattgctg
ggcagaattggtcgttatctgaaagaaccactgaaacctcgggtcattgacgagttgcgt
ccaaccagtaaagagccaagcgccaaatctaccggcaaaccgtcgaaaaaggttttagcg
aagcgtaaagagctgaaggcggccaacaaagaaaaaaccaaggttaaagtgcgccaccgc
gatgctaaaaatgtcggtaagcgccgtaaaccaaagaataaagctgacgcttaa
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