Yersinia hibernica LC20: LC20_00002
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Entry
LC20_00002 CDS
T03179
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
yel
Yersinia hibernica LC20
Pathway
yel03030
DNA replication
yel03430
Mismatch repair
yel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LC20_00002
03430 Mismatch repair
LC20_00002
03440 Homologous recombination
LC20_00002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yel03032
]
LC20_00002
03400 DNA repair and recombination proteins [BR:
yel03400
]
LC20_00002
Enzymes [BR:
yel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LC20_00002
DNA replication proteins [BR:
yel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LC20_00002
DNA repair and recombination proteins [BR:
yel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LC20_00002
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
AHM71258
LinkDB
All DBs
Position
1394..2494
Genome browser
AA seq
366 aa
AA seq
DB search
MKFIIEREHLLKPLQQVSSPLGGRPTLPILGNLLLQVTEDSLLLTGTDLEMEMVARVALS
QPHEQGATTVPARKFFDIWRGLPEGAEITVALDGDRLLVRSGRSRFSLSTLPAADFPNLD
DWQSEVEFTLPQATLKRLIESTQFSMAHQDVRYYLNGMLFETEGEELRTVATDGHRLAVC
SMPVGQTLPSHSVIVPRKGVMELVRLLDGGDTPLRLQIGSNNIRAHVGDFIFTSKLVDGR
FPDYRRVLPKNPDKILKASCDLLKQAFARAAILSNEKFRGVRLYVSQNQLKITANNPEQE
EAEEILDVSYDGAEMEIGFNVSYVLDVLNALKCEDVSLLLTDSVSSVQIEDGASQAAAYV
VMPMRL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatcattgaacgtgagcatttgctaaaaccgctgcaacaggtcagtagcccg
ctgggtggacgccctacgttgccaatcttgggtaacttgttgctgcaagtcacagaagac
tctttgctgctgactggtactgatctggaaatggagatggtggcgcgcgtggcgctgtct
caacctcacgagcagggtgcgaccacggtgcctgcccggaagttttttgatatctggcgt
ggtttgccggaaggtgcggaaattactgtcgcgttagatggcgaccgtctattggtgcgt
tctggccgtagccgtttctcgctgtcaacattacccgcggcagacttcccgaatctggat
gattggcaaagtgaagttgaattcactttaccgcaggcaactttgaagcggctgattgag
tcgacccagttctcaatggctcatcaggatgtgcgctattacttaaacggcatgctgttt
gagactgaaggtgaggagttgcgtactgtcgcaactgatggtcaccggttagcggtttgt
tcaatgccagtgggccagacgctaccttcacactcggtgattgtgccgcgtaaaggtgtg
atggagttggtcagattactggatggtggtgatacgccattgcgcctgcaaatcggcagt
aataatatccgcgctcatgtgggtgattttattttcacctcgaagttggttgatggccgc
ttcccggattatcgtcgcgtattaccgaaaaacccagataaaatactgaaagccagttgt
gatttgctgaaacaggcttttgctcgtgcggccattttgtccaatgagaagtttcgtggt
gtgcggttgtatgttagccaaaaccagctcaaaatcaccgcgaacaaccctgagcaggaa
gaagcggaagagatcctcgatgttagctacgatggggcggaaatggagatcggtttcaac
gtcagttatgtgcttgatgtacttaatgcactcaagtgtgaagatgtcagcctattactg
accgactcggtctcgagcgtacagattgaagatggtgcgagtcaggcggcggcctatgtt
gtcatgccaatgcggttgtga
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