Yersinia hibernica LC20: LC20_00051
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Entry
LC20_00051 CDS
T03179
Name
(GenBank) selenocysteinyl-tRNA-specific translation elongation factor SelB
KO
K03833
selenocysteine-specific elongation factor
Organism
yel
Yersinia hibernica LC20
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
yel03012
]
LC20_00051
Translation factors [BR:
yel03012
]
Eukaryotic type
Elongation factors
LC20_00051
Prokaryotic type
LC20_00051
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
Beta-barrel_SelB
WHD_2nd_SelB_bact
WHD_1st_3rd_SelB
WHD_3rd_SelB
WHD_2nd_SelB
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
SRPRB
ETF
GlnD_5th
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AHM71307
LinkDB
All DBs
Position
55334..57223
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AA seq
629 aa
AA seq
DB search
MIIATAGHVDHGKTTLLQALTGVNADRLPEEKQRGMTIDLGYAYWPQPDGNIIGFIDVPG
HEKFLANMLAGVGGINHALLVVACDDGVMAQTREHLAILRLTGRPTLTVALTKADRVDDE
RIAQVRQQVMAELLAQGWQAEQVTLFVTAATAERGISELRAHLARCNQQDTDNSRLQRRF
RLAVDRAFSVKGAGLVVTGTALAGKVAVGDTLWLTGSDGPVRVRGIHAQNQDTQQAQAGQ
RIALNITGNVSKEQISRGDWLLAQQPPEAVDRVLVIVDADEPIQHWQPLHLHHAASHITG
RFSLLNNPQPDAKNPVILAELLLDTPLWLVENDSLILRDIAAKKTLGGARVIHLAAPKRG
KRQPAFLAWLTALAQATTDRAVLALHLAQGPVSVDKFSWARQLNSHDMATLLAGTDCVVA
GDIALSSPHAQQAQQTLLHVLCLYHQQHSDQLGLGRARLRRMALPTLDEALVFRLIDNML
AQGALKNTRGWLHLPEHGLGFTEQEQALWQQVAPYFADDPWWVRDLATELGRDESEVRAL
LRKAAQLGYITAIVADRYYLSQRIEQFADLIRELDASQGSASTTDFRDRLGIGRKLAIQI
LEFFDRSGFTRRRGNDHLLRDRGLFSSVN
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgattattgcaactgcgggtcatgttgaccacggtaaaaccacgcttttacaggcgctt
accggcgttaatgccgaccgcttgccggaagaaaaacagcgcggtatgactattgacttg
ggttatgcctattggcctcaacctgatggcaacattatcgggtttattgatgttcctgga
catgagaaatttctggccaatatgttggcgggcgtgggcggcatcaatcatgcattgctg
gtggtggcctgtgatgatggtgtgatggcgcaaacccgtgagcatctggctattctgcga
ctgacgggccgcccgacattaaccgtcgcgctgaccaaggctgaccgagtggatgacgag
cgtatcgcgcaggtgcgccagcaggtgatggctgagctgttagcccaaggctggcaggcc
gagcaagtcacactgtttgtcacggcggcgacggccgaacgtggcatcagcgaattgcgc
gcgcatctggcgcgctgcaatcagcaagatacagataatagccggttgcagcggcgtttt
cgcctggcagtcgaccgcgcattcagtgtgaaaggcgcaggtttagtggtcaccggcacg
gcactcgcgggcaaagtggcggtgggtgataccctatggctcacaggcagcgacggcccg
gtgcgggtgcggggcatacatgctcaaaatcaggatacccagcaagcgcaagcgggtcag
cgtatcgcgctaaatatcaccggcaatgtcagcaaggaacaaatcagtcggggcgattgg
ctattggcgcagcagccacctgaagccgtggatcgggtattggttatcgtcgatgccgat
gaacccatacagcactggcaacctctgcatttacatcatgccgccagccatattactggg
cgcttctctctgctcaacaatcctcaacctgatgctaagaacccagtaatactggccgag
ctattgctggatacccctctgtggctggttgagaatgatagtcttatcctgcgggatatt
gctgcgaagaagacattgggcggggcgcgagtcattcatctggctgcgcccaaacgcggt
aaacggcaaccagcatttttagcctggttaactgcattggcgcaggccacaacagaccgc
gcagtgctggcattgcatttggcgcaaggcccggtttctgtggacaaattcagttgggcg
cgtcagcttaacagccatgatatggcaacattattggcgggtactgactgtgttgttgcg
ggcgatattgcattgtctagcccgcatgcccagcaagcacaacaaaccttattgcatgtt
ttatgtctttatcatcaacagcatagtgaccagctagggttagggcgggcacgtttgcgg
cgcatggcattgccgacattggacgaagcgctggtgtttcgtttgattgacaatatgctg
gcgcagggcgcattaaaaaacacgcgcggctggttacatttaccagagcatgggctgggg
tttactgagcaagaacaggcgctatggcagcaagtggctccctattttgctgatgatcca
tggtgggtgcgggatttagccaccgagctgggaagggatgaaagtgaggtgcgcgctctg
ctacgcaaagctgcgcaactgggctacatcaccgccattgttgcggatcgctattatctg
agtcagcgtattgagcagtttgctgatttgattcgtgaattggatgccagccaaggtagc
gccagcaccacagatttccgcgataggctggggataggccgcaagctggcgattcaaatc
ctggagtttttcgaccgcagcggcttcacccgtcgtcggggcaatgaccatctattacgc
gaccgcggattgttttcttctgtgaattga
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