Yersinia hibernica LC20: LC20_00630
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Entry
LC20_00630 CDS
T03179
Symbol
treR
Name
(GenBank) HTH-type transcriptional regulator TreR
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
yel
Yersinia hibernica LC20
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yel03000
]
LC20_00630 (treR)
Transcription factors [BR:
yel03000
]
Prokaryotic type
Helix-turn-helix
LacI family
LC20_00630 (treR)
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Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_1
Peripla_BP_3
Peripla_BP_4
HTH_3
HTH_23
HTH_31
HTH_IclR
MarR_2
HTH_7
CENP-B_N
HTH_Tnp_ISL3
HTH_Crp_2
TrmB
MarR
AAA_18
HTH_AraC
HTH_24
HTH_26
SpoIIID
HTH_17
Motif
Other DBs
NCBI-ProteinID:
AHM71886
UniProt:
A0A7U4GCQ7
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All DBs
Position
563896..564843
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AA seq
315 aa
AA seq
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MQNRLTIKDIARMSGVGKSTVSRVLNNEGSVSPLTRERVEAVIRQQGFTPSKSARAMRGQ
SDKVVGIIVSRLDSPSENQAVRTMLPLFYQQGYDPILMESQFDPKLVSEHLQVLQQRHVD
GVILFGFTGLTAEILSPWQEKMVVLAREYTGFSSVCYDDEGAVRLLMDKLRQAGHRHISY
IGVQPTDATTGLRRHQSYLDYCQQYGLTATVALGELSYQSGFQLAPQVIKPDTSALVCAS
DTIAMGVSKYLQQQGQQNIQVCGIGNTPLLSFLFPNSLSVELGYGSAGVQAAQQLLDQLN
NHQSIQQIIIPGQLA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaccgtttgaccattaaggacattgcccgcatgagtggcgttgggaaatccacc
gtttcacgggttttgaataacgagggcagtgtcagcccactgactcgcgagcgggttgag
gcggttatccgtcaacagggttttaccccgtcaaagtcagcccgcgccatgcgggggcag
agtgataaagtggtgggaattatcgtctcacgcttggattcaccatctgaaaatcaggcg
gtgcgcaccatgctgccgctattctatcagcaaggttacgacccgattttgatggagagc
cagtttgaccccaagttggtcagtgagcatttgcaggtattacaacagcgccatgtcgat
ggcgtaattctgtttggtttcacgggcttaaccgcagaaatactctcgccatggcaggag
aaaatggtggtgttggcgcgcgaatatacgggtttttcttcggtttgttatgacgacgag
ggcgcagtgcggttgctgatggataaactgcgtcaggccgggcatcgccatattagctac
atcggcgtgcaacctacggatgccaccactggcttgcgtcgtcatcaatcttatctcgat
tactgccagcaatatggtttgacggcgactgttgcgctgggtgaattgagttatcaaagc
ggcttccagctcgcgccacaagtgataaaaccggatacctcagcattggtctgtgcctct
gataccatcgccatgggggtaagtaagtacttgcagcagcaaggacagcaaaatatccaa
gtctgtggtattggcaatacgccgctgttgagtttcttgtttcctaatagcctatcagtg
gagctaggttacggcagtgccggtgtgcaagcggcacagcaactgcttgaccaactgaat
aatcaccaatctattcaacaaattatcatccccggtcaattggcttga
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