KEGG   Yersinia hibernica LC20: LC20_00906
Entry
LC20_00906        CDS       T03179                                 
Symbol
clpV
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
yel  Yersinia hibernica LC20
Pathway
yel03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:yel00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LC20_00906 (clpV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:yel02044]
    LC20_00906 (clpV)
Secretion system [BR:yel02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LC20_00906 (clpV)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_22 AAA_16 nSTAND3 NACHT AAA_7 AAA_25 AAA_24 AAA_14 ATPase_2 bpMoxR IstB_IS21 Zeta_toxin Sigma54_activat TniB Clp_N SRP54 NBD_SMAX1 DUF815 GlnR_1st Hpr_kinase_C
Other DBs
NCBI-ProteinID: AHM72162
UniProt: A0A7U4GD25
LinkDB
Position
819605..822253
AA seq 882 aa
MTTHSAHLLRRLNPYCAQALAGAATLCQTRAHAEITVEHWLLKLLEQGEGDITVIARRYE
WDMDSLWQGLLAHLETLPRTVQGKPQLSAALQQLIKSAWLDASLQEDANAVRSVHLLAAL
INTPSLLAAEAAWPLLSLSATQLHRLLPLLDSQSDERPEVQQAAALADSPVNLTDEAPTT
HSASGQPQLNDALQAALDKFTLDVTAKAKTGQIDPIFGRDSEIRQMVDILSRRRKNNPIL
VGEPGVGKTALVEGLALRIAEGNVPDSLKTVSLRTLDLGLLQAGAGVKGEFEQRLKNVIE
AVQQSPTPVLLFIDEAHTIIGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFE
RDAALERRFQMVKVDEPDDARASLMLRGLKGRYAQHHGVHILDSAITAAVTLSRRFLTGR
QLPDKAVDLLDTAGARVRMSIDTLPAALMEINAELAALEMEQQAIEQDLLLLPNIGSTRL
SEIDQRRAELLVGQQQLKQQYEAEQRLTTLIIDARQDIANAAHLARLQEELSQIQGNAPL
LSLDVDVRTVATVIADWTGVPLSSLLKDEQTDLLQLENHLATRVVGQDAALVDMAQRLRA
AKTGLTSENGPLGVFLLVGPSGVGKTETALALADTLFGGEKSLITINMSEYQEAHTVSQL
KGSPPGYVGYGQGGILTEAVRKRPYSVVLLDEVEKAHSDVINLFYQVFDRGFMRDGEGRE
IDFRNTVILMTANLGSDHLMQLLDEQPEATHSDLHELLRPILRDHFQPALLARFQTLIYR
PLDAIALRTIVEMKLAQVAKRLNKHYGLHCTIEESLYDTLVAACLLPDTGARNIDSLLNQ
QILPVLSQQLLSRMSEQQRTTLLTLGWDEADGITLEFEGGEK
NT seq 2649 nt   +upstreamnt  +downstreamnt
atgacaactcattcagcacacttattacgtcggttaaatccctattgcgcgcaggcactg
gccggtgctgcaaccctgtgtcagacccgtgcccatgccgagataaccgttgaacattgg
ttgttgaaactgctggaacagggcgaaggcgatatcaccgttattgcccgtcgttatgag
tgggacatggacagtctgtggcagggattgctggcccatttggagaccctaccccgcacg
gtacagggcaaacctcagttgtcagccgcgttacagcaactgatcaaaagtgcctggttg
gatgcgtcgttacaggaagatgctaatgcggtgcggtccgtccatctgttggcggccctg
ataaatacgccatcactattggccgcagaagctgcctggccgctgctgagcttgagtgcg
acccagttgcaccgcctgttaccgttgctggacagccaatccgatgagcgtcccgaagtt
cagcaggcagcagctctggcggacagcccggtcaacttgacggatgaagccccaaccacc
cactcggccagcggtcagccccaactgaatgacgccctgcaagcggcgctggataaattc
actctggacgtcaccgctaaagcaaaaaccgggcagattgacccgatttttggtcgcgat
agcgagatccgccagatggtcgatatcctgtcgcgccgccgtaaaaacaacccgattctg
gtcggcgaaccgggcgtgggtaaaaccgcgctggttgaagggttagctttgcgcattgct
gaaggcaacgtgccggatagcctgaaaaccgtcagtttgcggaccctggacttgggcctg
ttgcaagccggggcgggggtcaaaggcgagttcgaacagcgcctgaaaaatgttatcgag
gcggtgcaacaatcgccgacgccagtactgctgtttatcgacgaagcccacaccattatt
ggtgccggtaatcaggccggtggcgcagatgccgccaacctgctcaaacccgcactggcc
cgtggcgaattacgcaccatcgctgctaccacgtggtcggaatacaaacagtattttgaa
cgcgatgcggcactggaacgccgcttccagatggttaaggtcgacgagccggacgacgct
agagccagcctgatgctgcgtggcttaaaaggccgttatgcccagcaccacggcgtgcac
attctggattccgccattaccgctgctgtcacgctctcccggcgctttttgaccggtcgc
caactgccggataaagcggtggatctgctcgataccgccggtgcccgagttcgcatgagc
attgatacgctgcccgctgcattgatggagattaatgctgaactggctgcgctggagatg
gagcaacaggccatcgaacaggacttactcctgttgccgaacatcggttcaacgcgctta
tctgagattgaccaacgccgcgcagaactgctggttggacagcagcagcttaaacagcaa
tatgaagcagagcaacgcctcaccaccctgattatcgacgcgcgtcaggatatcgccaac
gcggcacatctggccaggttgcaggaagaattaagccagattcagggtaatgcgccgctg
ctgtcgctggatgttgatgtccgcacggtggcgacggttatcgctgactggaccggcgtc
ccgctgagtagcttgctgaaagatgaacagaccgatttgttgcaactggaaaaccatctt
gccacccgggtggtgggtcaggatgcggcgctggttgatatggcacaacgcctgcgcgcc
gccaaaaccggcctgacctccgaaaatggtcctctgggcgtattcctgctggtcgggccg
agtggggtgggtaaaaccgagaccgcactggcgctggccgatacgctgttcggcggtgaa
aaatcgctaatcaccatcaacatgtccgaatatcaggaggcgcacaccgtctcccaactc
aaaggttcgccaccgggctatgtcggttacggtcagggcggtattctgactgaagcggta
cgcaagcgcccgtacagtgtggtgctgctggatgaagttgagaaagcgcactccgatgtc
attaacctgttctatcaggtatttgaccggggctttatgcgcgacggtgaagggcgcgaa
attgattttcgtaacaccgtgatcctgatgacggccaatctgggcagtgaccatctgatg
caattgcttgatgaacaaccggaagcgacccatagcgatctgcacgaactgctgcgcccg
atcctgcgcgaccatttccagcccgcgctattagcccgcttccagaccctgatctaccgg
ccactggacgccatcgcattgcgcaccatcgtcgaaatgaaactggcacaagtcgccaag
cgtctgaacaaacactacggtctgcactgcacgattgaagaaagcctatacgacacgctg
gtcgccgcctgcctgttgccggacaccggggcgcgcaacatcgacagcctgctgaatcag
cagatcttgccggtattgagccaacaactgttaagccgtatgagcgagcaacagcgcacc
accttgctgacgttgggctgggatgaagccgacggtattacccttgaatttgaaggaggc
gaaaaatga

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