Yersinia hibernica LC20: LC20_01203
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Entry
LC20_01203 CDS
T03179
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
yel
Yersinia hibernica LC20
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
yel03029
]
LC20_01203 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yel02000
]
LC20_01203 (bamA)
Mitochondrial biogenesis [BR:
yel03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
LC20_01203 (bamA)
Transporters [BR:
yel02000
]
Other transporters
Pores ion channels [TC:
1
]
LC20_01203 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_1
ShlB
Motif
Other DBs
NCBI-ProteinID:
AHM72457
UniProt:
A0A7U4K0F6
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All DBs
Position
1069219..1071606
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AA seq
795 aa
AA seq
DB search
MAMKKLLIASLLFGSATVYGADGFVVKDIHFEGLQRVAVGAALLNMPVRVGDTVSDDDIG
QTIRALFATGNFEDVRVLRDGNTLIVQVKERPTIASITFSGNKAVKDDMLKQNLEASGVR
VGEALDRTTISNIEKGLEDFYYSVGKYSASVKAVVTPLPRNRVDLKLVFTEGVSAKIQQI
NIVGNHSFTTDELISRFQLRDEVPWWNVVGDRKYQKQKLAGDLETLRSFYLDRGYARFNI
DSTQVSLTPDKKGIYITINITEGDQYKLNSVVVSGNLAGHQSEADKLAKIEPGELFNGSK
VTRMEEDIKKMLGRYGYAYPRVVSQPEINDADKTVKLHINVDAGNRFYVRNVRFEGNDTS
KDSVLRREMRQMEGAWLGNDQVEAGKERLNRLGYFETVDVETQRVPGTADQVDVTYKVKE
RNTGSLNFGIGYGTESGVSFQVGVQQDNWLGTGNTVGINGTKNDYQTYAEFTLTDPYFTV
DGVSLGGRIFYNDFKADNADLSGYTNSSYGVDGTLGFPINENNSLRVGLGYVHNDLSDME
PQVAMWRYLDSVGQRPGYTGREGFTTDDFTLNLGWTYNNLDRGFFPTSGVKSSVNTKVTV
PGSDNEFYKVTFDTSAYQPLDEDRSWVLLGRGRLGYGGGIGSKEMPFYENFYAGGASSVR
GFRSNNIGPKAAYYANNGATVNNSTDAVGGNAMAVASLELITPTPFISEKYSNSVRTSVF
IDSGTVWDTNWENTAETRAAGIPDYSKASNIRVSAGVALQWMSPLGPLVFSYAKPVKDYE
GDKSEQFQFNIGKTW
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgaaaaagttgctcatagcgtcgctgctgtttggcagcgccaccgtatacggt
gcagacgggttcgtagtgaaagatattcatttcgaaggcctgcaacgggtcgccgtcggt
gcggcgttacttaatatgccggttcgcgtaggcgataccgtcagtgatgatgacatcggt
caaactattcgtgcgttgtttgctacaggcaactttgaggacgttcgcgtcctgcgcgat
ggtaatacgctgattgttcaagtcaaagaacgcccaacgattgccagcatcactttctcc
ggtaataaagcggtgaaagatgacatgctgaagcagaatctggaagcctctggcgtccgg
gttggcgaagccttggaccgtaccactatatccaacattgaaaaaggactcgaagacttc
tactacagcgtgggtaaatacagtgcttctgtgaaggctgtcgttacgccattgccacgt
aatcgcgtcgatctcaaattggtctttaccgagggtgtatctgcaaaaattcagcagatc
aacatcgtcggtaatcacagtttcacaactgatgaacttatctcgcgcttccaattgcgt
gatgaagtgccatggtggaacgtggttggggatcgtaaatatcagaagcagaaactggcc
ggtgaccttgaaaccttacgcagtttctatttggaccgaggttatgctcgctttaacatc
gattcaacccaagtgagtttgacgccagataaaaaaggcatctatatcactatcaatatt
actgaaggcgatcaatacaagcttaacagcgtggttgtgagcggtaatcttgcgggccat
caatctgaagcggataaactggcgaagattgagccgggtgaactgtttaacggcagtaaa
gttacgcgcatggaagaagacatcaagaagatgttgggccgttatggctatgcttacccg
cgtgttgtatctcagccggaaattaatgatgcggataaaacagtcaaactgcatatcaat
gtagatgcggggaatcgcttctatgtccgtaatgtccgtttcgagggtaatgacacgagt
aaagactctgtgttgcgccgtgaaatgcgtcaaatggaaggtgcgtggctgggtaatgat
caagtcgaagccggtaaagaacgtttgaaccgtttaggctatttcgagactgttgatgtt
gaaactcaacgcgtcccggggacggctgatcaggttgatgtgacttataaagttaaggaa
cgcaacaccggtagcctgaactttggtatcggttacggtactgaaagtggcgtgagcttc
caggtcggtgtacagcaagataactggttaggtaccggtaatactgtcggtattaacggc
acgaaaaatgactaccagacctatgctgagtttaccttaactgacccttacttcaccgtt
gatggtgttagtctgggcggccgtatcttctataatgattttaaagctgataacgcagac
ctgtctggctataccaacagcagctacggtgtggacggtactttaggcttcccgatcaat
gaaaataactcattgcgcgtcggcttaggttacgtccataacgacctgtctgatatggag
cctcaggttgcaatgtggcgatatctggattcagtcggacaacgaccgggctatactggc
cgtgaaggctttacgactgacgactttacgctgaacctaggttggacatataacaacctc
gaccgtggcttcttcccaacttcgggggtgaaatcatcggtgaatacgaaagtgactgtg
ccgggctctgataatgagttctacaaagtgacattcgatacgtcagcatatcagccatta
gatgaagatcgttcgtgggtgctattgggccgtggtcgcttgggttatggtggcggtatc
ggttcgaaagaaatgccattctacgaaaacttctatgcaggtggtgctagctccgttcgt
ggcttccgatctaataacatcggtccaaaagctgcgtattatgccaataatggggctaca
gttaataactctaccgatgcggtaggggggaacgcgatggcggtggccagtttagaactg
attacaccgacaccgttcattagcgagaaatactcaaactctgtccgtacttcggtcttt
attgactcaggtaccgtatgggataccaattgggaaaataccgcagaaacacgagctgca
ggtattcctgattacagtaaagccagcaatattcgtgtctctgccggggtagcactacaa
tggatgtcgccattggggcctttagtgttctcatatgctaaaccggttaaagattacgag
ggcgataagtcagagcaattccagtttaacattggtaaaacttggtaa
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