Yersinia hibernica LC20: LC20_01234
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Entry
LC20_01234 CDS
T03179
Name
(GenBank) tRNA/rRNA methyltransferase
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
yel
Yersinia hibernica LC20
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yel03009
]
LC20_01234
03016 Transfer RNA biogenesis [BR:
yel03016
]
LC20_01234
Ribosome biogenesis [BR:
yel03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LC20_01234
Transfer RNA biogenesis [BR:
yel03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
LC20_01234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
AHM72488
UniProt:
A0A7U4GDJ0
LinkDB
All DBs
Position
1106632..1107726
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AA seq
364 aa
AA seq
DB search
MNDSFSGKNGKVKVMYVRSDENSSDDRNSNNRGKNQRPAGKGRPGDNAGRGSSPRNNDSR
RNDSGRNERVSPSRPARSDSSGPYDSPWKTVSRAPSEEPEFDHGGISGKSHVDPAQLRRQ
RAEETRVYGENACKALFESRPDAIVRAWFVQSVTPRFREALKWMAANRKAYHVVEEDELA
KASGTEHHGGVCFLIKKRQGLDAATYLQQQTRAKDCVLALEDVGNPHNLGGIMRTCAHFG
INGVLLQDPAMLESGAAVRTAEGGAEHIKAINADDFLSVLDTFRKAGYTIVTTSSHKGVS
LAKAELPAKMVLVLGQESDGLTDSAWQQGDVSVSIGGTGKVESLNVSVATGILLAEWWRQ
NSAQ
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaacgattcatttagtggcaaaaacggcaaagttaaagtgatgtacgtccgcagtgac
gaaaacagcagcgacgaccgtaacagcaataaccggggtaaaaaccagcgtcctgcaggt
aaaggtcgtccgggggataatgcgggtcggggcagttcaccgcggaataatgactcacgt
cgtaatgattctggccgtaatgaacgcgtgagtcctagccgtccggcgcgatcagatagc
agtggcccatatgattcaccgtggaagacggtatctcgtgcgccctctgaagagccagag
tttgatcatggcggtatcagcggcaaaagccatgtggatccagcacagttgcgccgtcaa
cgggctgaagaaacacgtgtttatggtgaaaatgcctgtaaagcactgtttgaaagccgc
cctgatgctatcgtgcgcgcctggtttgtacagtcagtgaccccacgttttcgcgaagca
ctgaaatggatggcggctaaccgcaaggcttaccatgtggttgaagaagatgagctggct
aaggcgtctggcactgaacatcatggtggcgtgtgcttcttaattaaaaaacgtcagggt
ctggatgcagcaacctatctgcaacagcagactcgggcgaaagattgtgtgctggcactg
gaagatgtgggtaacccacataatctgggcggcatcatgcggacttgtgcccacttcggt
attaacggcgtgttgctgcaagacccggccatgctggagtcaggtgcggcagtgcgcaca
gcagaaggcggtgctgagcatatcaaagccatcaatgccgatgatttcctctcggtgctg
gataccttccgtaaagcgggttacaccatagtgacaacctcaagccataaaggtgtcagt
ctggcgaaagcggaactgccagccaaaatggtgctggtgttagggcaagagagtgatggt
ttgactgacagcgcttggcagcagggcgatgtgagtgtgtctatcggcggtactggcaaa
gtcgaaagcctgaatgtttcggtggcgacggggattttgttagctgagtggtggcgtcaa
aatagcgcccaataa
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