Yersinia hibernica LC20: LC20_01360
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Entry
LC20_01360 CDS
T03179
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
yel
Yersinia hibernica LC20
Pathway
yel03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LC20_01360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yel03400
]
LC20_01360
Enzymes [BR:
yel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LC20_01360
DNA repair and recombination proteins [BR:
yel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LC20_01360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Motif
Other DBs
NCBI-ProteinID:
AHM72614
UniProt:
A0A7U4GDQ6
LinkDB
All DBs
Position
complement(1225738..1225992)
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AA seq
84 aa
AA seq
DB search
MPKKAASPETKVASFETSLSELEQIVTRLESGELPLEEALNEFERGVQLARIGQQTLLQA
EQRVQVLLSDEVDAPLAPFTPDAE
NT seq
255 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaaaagccgcatcacctgaaacaaaagtcgccagctttgagacatcgctcagt
gaactggaacagatagtgactcgcctcgagtccggtgaactcccgctggaagaggcgtta
aatgaatttgaacgtggcgtacaattagcacgtattggtcaacagactctgctgcaagcc
gaacaacgtgttcaggttctcctgagcgacgaagtagacgcgccattggccccgttcacg
ccggatgctgagtag
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