Yersinia hibernica LC20: LC20_01448
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Entry
LC20_01448 CDS
T03179
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
yel
Yersinia hibernica LC20
Pathway
yel03030
DNA replication
yel03430
Mismatch repair
yel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LC20_01448
03430 Mismatch repair
LC20_01448
03440 Homologous recombination
LC20_01448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yel03032
]
LC20_01448
03400 DNA repair and recombination proteins [BR:
yel03400
]
LC20_01448
Enzymes [BR:
yel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LC20_01448
DNA replication proteins [BR:
yel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LC20_01448
DNA repair and recombination proteins [BR:
yel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LC20_01448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_tau_4
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_5
AAA_18
AAA_30
AAA_2
PIF1
ResIII
AAA_14
AAA_assoc_2
AAA_16
AAA_7
Pneumo_att_G
TsaE
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AHM72702
UniProt:
A0A7U4GDT9
LinkDB
All DBs
Position
1298359..1300326
Genome browser
AA seq
655 aa
AA seq
DB search
MSYQVLARKWRPKTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK
GLNCETGITATPCGICANCLEIEQGRFVDLIEIDAASRTKVEDTRELLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPAHVKFLLATTDPQKLPVTILSRCLQFHLKVIDV
EVIRAQLEKILLAEQISSDARALQLLARAADGSMRDALSLTDQAIAMGDGQVTTATVSQM
LGTLDDEQPLAIIEALVSADGARVMAQLEQAASRGVDWENLLVETLSLLHRIAMVQLLPS
MLDNHYATIEPRLRELARTLPPTDIQLYYQTLLVGRKELAYAPDRRMGVEMTLLRALAFH
PKAIIAEPQIVSASPPAAIADNTSVSQHMQAALHTQHAPQHEAPPLGAAVQVNTELPDST
AQLLQARTQLLRQSGTTTAKKNEPAAPGKARPANSTLERLASVTERSQQRLAAKSTEEKK
PAKKEAYRWTAQNQPEVAAEPVATPKALRSALEHEKTPELSAKLAQEAMLRDPWAAEIDK
LQIPKLVQQLALNAFKEEIEPGNICLHLRSAQRHLNSPAAQKALADALSELHGNAVTLSV
IEDDNPAERTPLEWRQAIYEEKLVQARQSIIADNNIQTLRRFFDAELDEESIRPV
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggtccttgcccgtaagtggcgccccaaaacgtttgcagacgtcgttggt
caggaacatgttctgacggcgttggccaacggcctttcattagggcgaattcatcacgcc
tatttattttctggtacccgcggggtaggtaagacctctatcgcccggttgctggccaaa
ggacttaattgcgaaacggggattactgccaccccttgcggtatctgtgctaactgcttg
gaaattgagcaaggccgttttgttgacttgattgaaattgatgccgcttcgcgcaccaaa
gttgaagatacacgcgagctactggataatgtccagtacgcccccgcccgtggccgcttc
aaagtctatttaatcgatgaagttcatatgttgtcacggcacagtttcaacgctttgttg
aaaactcttgaagagccgcctgctcatgtgaaatttctgctagcgacgacagacccacaa
aagttgcccgtcaccatactttcccgctgtttgcagtttcacctcaaagtcattgatgtt
gaggtgatccgggcgcagcttgagaagatattgctagctgaacaaatcagtagtgatgct
cgagcattgcaattactggcgcgagcggctgatggcagtatgcgcgatgcgctgagtttg
accgatcaggcgatagccatgggcgatggtcaggtcacgactgccactgtcagtcaaatg
ctagggacgttagatgatgaacagccgctggcgatcattgaagcgctggtgagtgcggat
ggcgcgcgggtgatggctcagcttgaacaagcggcatcccgtggtgttgactgggaaaat
ctgttagttgaaaccttaagtttgctacaccgcattgcgatggtgcagctattgccatcg
atgctggataatcattacgccaccatcgaaccgcgcttacgtgagctggcccgaacgcta
ccgccgacagatattcagttgtactaccagaccttgctggtggggcgaaaagagttggca
tacgccccagaccgccgcatgggggttgaaatgaccttgttgcgggcattggcgtttcac
ccgaaagccatcattgccgagccgcagattgtctctgccagccccccggctgcaattgct
gataatacttcagtatcgcagcatatgcaggcagcgcttcacactcaacatgcgccacag
cacgaggctccaccattaggtgcagcggtgcaggtcaataccgagctgccggattctacc
gcgcaattgcttcaagcacgcacgcaattactgcgccagtcggggacgacgacagcaaaa
aagaatgagccggcagcgccaggaaaagcgcggccggcaaactcaacactggagcgctta
gcttcggtgactgagcgtagccaacagcgactggcggctaaatccacagaagaaaagaaa
ccagcgaagaaagaagcttaccgctggacggcgcagaatcagcctgaggtagcggcagag
ccggtggccacccctaaagccttgcgttctgcgctggagcatgaaaagacgccggaactg
tctgctaaattggcgcaagaggcgatgctgcgagacccatgggccgcagagattgataag
ctacagattcctaaattggtgcaacaacttgcgctgaatgcatttaaagaagaaatagaa
ccgggtaatatttgccttcacttgcgttctgcccagcgccatttaaactcgccagcggcc
caaaaggcattggcagatgcattgagcgaattacacgggaatgccgtcaccctgagtgtt
attgaagatgataacccggcggagcgcactccgctggaatggcggcaagccatttatgaa
gaaaaactggtacaagcacgccagtcaattattgcggataataatattcaaacactgcgt
cgctttttcgacgccgaattggatgaagaaagtatccgaccggtttaa
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