Yersinia hibernica LC20: LC20_01610
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Entry
LC20_01610 CDS
T03179
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
yel
Yersinia hibernica LC20
Pathway
yel03030
DNA replication
yel03430
Mismatch repair
yel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LC20_01610
03430 Mismatch repair
LC20_01610
03440 Homologous recombination
LC20_01610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yel03032
]
LC20_01610
03400 DNA repair and recombination proteins [BR:
yel03400
]
LC20_01610
Enzymes [BR:
yel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LC20_01610
DNA replication proteins [BR:
yel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LC20_01610
DNA repair and recombination proteins [BR:
yel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LC20_01610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
CcdB
Motif
Other DBs
NCBI-ProteinID:
AHM72864
UniProt:
A0A7U4GE05
LinkDB
All DBs
Position
complement(1422685..1423719)
Genome browser
AA seq
344 aa
AA seq
DB search
MIRVYPEQLVAQLHEGLRACYLLCGNEPLLLQESQDHIRRVASSHNFSEHFSFSLDAHTE
WENIFSLCQALSLFASRQILLLNFPDSGLTAAMNEQLVKLSSLLHPDILLILRANKLTKA
QENSAWFKALSPNGVVVSCQTPEQAQLPRWVNTRAKNLNLEIDDAAVQLLCYCYEGNLLA
LSQALERLSLLYPDGKLTLPKVEQAVNDAAHFTPYHWLDALLAGKSKRAWHILQQLQQED
SEPVILLRTLQRELLLLLTLKRRMEQAPLRTLFDQFKVWQNRRPMMTQALQRLSMQQLQQ
AVHLLAQIEVRLKQDYGESIWPELETLSMLMCGKILPESFFDGQ
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgatccgagtttaccctgaacaacttgtcgcgcagctccatgaggggctgcgcgcttgt
tatctgttatgtggtaacgaacctttactgttacaggagagtcaggatcacattcgccga
gtggcatcatcacataatttcagcgaacacttcagtttttcactggatgcccacactgaa
tgggagaatatcttcagtctctgtcaggcgctgagtttatttgccagccgtcagatactg
ctgctgaatttccccgacagtggattaacggccgccatgaatgagcaattagtgaaatta
tctagcctattgcacccagatattttactgatattacgggccaacaaactcactaaagcc
caggaaaacagcgcctggttcaaagccctcagcccaaatggtgtggtcgtcagttgccag
acacctgagcaagcgcagcttccgcgttgggtgaacacccgcgccaagaacttgaatcta
gaaattgatgatgccgctgtccagctactatgttactgctatgaaggtaacttgctggca
ttatcccaggccttggaacggctgtcgctgctttaccccgacggcaagctgacactgccc
aaagttgagcaagccgtcaacgatgctgcacatttcaccccttaccactggcttgatgcc
ttgctggccgggaaaagcaaacgtgcctggcatattttgcaacagttacagcaagaagac
agtgaaccggttattttactgcgcacacttcagcgcgagttattgctgttgttaacacta
aaacgccggatggaacaggcacctttgcgaacattatttgaccaattcaaagtgtggcaa
aatcgccgtccgatgatgactcaagcactacagcgcctctccatgcaacaactgcaacaa
gccgtgcatttattagcgcaaatagaggttcgcctaaaacaggactatggcgagtcgatt
tggcccgagttagaaacgctgtctatgctgatgtgtggaaaaattttacctgagagtttt
tttgatggccaataa
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