Yersinia hibernica LC20: LC20_01665
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Entry
LC20_01665 CDS
T03179
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
yel
Yersinia hibernica LC20
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yel03400
]
LC20_01665
Enzymes [BR:
yel01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LC20_01665
DNA repair and recombination proteins [BR:
yel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LC20_01665
Prokaryotic type
LC20_01665
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
CON_HrpB
Motif
Other DBs
NCBI-ProteinID:
AHM72918
UniProt:
A0A7U4GE44
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All DBs
Position
1475104..1476549
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AA seq
481 aa
AA seq
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MATHLIWFRNDLRLTDNLALHAACQDPQATVIAVFIATPVQWAKHDMAPRQAAFLLQNLQ
LLRDALSAREIAFYYHQCDDFQDSIIWLDDFCQQQQVDALFYNQQYELNEQLRDEALVAR
LSRRAITCHRFHDSVLLPPGSVLTGNHEMYKVFTPFRRAFIQRLLLSDCRSVPAPNPRTT
PAVATSPLLAPFDYPQQPVDNQLFPAGEEAALQRLRSFCREDVQDYQQQRDFPAVAGTSC
LSPYLALGILSPRQCVNRLRAECPDWVENAEGGAFTWLNELIWREFYRHLLVAYPRLCQH
HPFIGWTDAVLWNPSEQQLIAWQQGRTGYPIVDAAMRQLNETGWMHNRLRMISASFLVKD
LLIDWRKGERYFMSQLLDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDKDGVF
IRRWLPELAAVPDSDIHQPWRWAQRQQQPLDYPPPLVDHKQARLATLAAFDAAKRDGSKD
P
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacatcttatttggtttcgtaatgatttacgcctaaccgataatctggcgctg
catgcagcatgccaggatccgcaagcgacggtaattgcggtgtttattgcgacccccgtg
caatgggctaagcatgatatggcaccgcgccaggcggcatttttactgcaaaatctacag
ctgctgcgcgatgcactcagcgcgcgggaaattgcgttttactatcatcagtgtgatgat
tttcaggattcgattatctggctggatgatttttgccaacaacaacaagtggatgcgctg
ttttataaccaacagtatgagttgaatgaacagctacgcgatgaagcattggtggcgcga
ctgagtcgccgagctattacttgccaccgttttcatgacagtgtgttattgccaccgggc
agtgtcctgaccggtaatcatgaaatgtacaaagtttttaccccatttcgccgggcattc
attcagcgtttactgctgagtgattgccgaagtgtaccggcaccgaaccctcggaccacc
ccagccgtggccacttcgccgcttttggcccccttcgattatccgcaacagccagtagac
aatcagttattcccggcgggtgaagaggcggcgctacagcgcctgcgcagtttctgccgc
gaggatgtgcaagactatcaacaacaacgcgatttcccagctgtggcgggcaccagttgc
ctgtcaccttatctggcgttggggattctttcgccccgtcaatgtgttaatcgcctacgt
gctgaatgcccagattgggtggaaaatgctgagggcggggcatttacttggcttaatgaa
ttgatttggcgtgaattttatcgtcatttattggtagcttatcctcggttatgccagcat
catccctttattggctggactgatgcagtattatggaatccctcagaacagcaattaatc
gcctggcagcaggggcggacaggttatcctattgtcgacgcagcaatgcggcagctaaat
gaaaccggttggatgcataaccgtttgcggatgattagcgccagttttttggtgaaagac
ttgttgatcgactggcgcaaaggtgagcgttattttatgtcgcaattattagacggtgat
ttagccgctaataatggtggctggcaatgggcagcatcaaccgggacagatgccgcgccc
tattttcgtatttttaatcccaccacgcagggcgagcgttttgataaagacggcgttttt
attcgccgctggttgccagaattggcggcggtacccgacagtgatattcaccagccgtgg
cgttgggcgcagcggcaacagcaaccattggattacccaccaccgctggtggaccataag
caggccagattggctacactcgcggcatttgacgccgctaagcgggatggcagcaaggat
ccctaa
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