Yersinia hibernica LC20: LC20_02553
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Entry
LC20_02553 CDS
T03179
Symbol
oppD
Name
(GenBank) oligopeptide ABC transporter ATP-binding protein OppD
KO
K15583
oligopeptide transport system ATP-binding protein
Organism
yel
Yersinia hibernica LC20
Pathway
yel01501
beta-Lactam resistance
yel02010
ABC transporters
yel02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LC20_02553 (oppD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LC20_02553 (oppD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LC20_02553 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yel02000
]
LC20_02553 (oppD)
Transporters [BR:
yel02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
LC20_02553 (oppD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_29
ABC_ATPase
DO-GTPase2
DUF87
Motif
Other DBs
NCBI-ProteinID:
AHM73806
UniProt:
A0A7U4K1A5
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All DBs
Position
2210249..2211250
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AA seq
333 aa
AA seq
DB search
MTTIDNQSAVQQNVLLDVKDLTVTFGTPDGDVTAVNALNFDLRAGETLGIVGESGSGKSQ
TAFALMGLLASNGRIGGSAKFNGREILNLPEKQLNRLRAEEISMIFQDPMTSLNPYMRVG
EQLMEVLQLHKKMSKSEAFEESIRMLDAVKMPEARKRMRMYPHEFSGGMRQRVMIAMALL
CRPKLLIADEPTTALDVTVQAQIMTLLNELKNEFNTAIIMITHDLGVVAGICNKVLVMYA
GRTMEYGQARDVFYHPSHPYSIGLLNAVPRLDAEGDSLTTIPGNPPNLLRLPKGCPFQPR
CQYAMERCATTPALEHFGDGRLRACYKPVGELV
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgattgataaccagtctgctgttcagcaaaatgttctgttggatgtcaaggac
ttgaccgtgacattcggcacaccagacggcgatgtgacggctgttaatgcccttaatttt
gacctgcgtgccggggaaactctcggtattgtgggcgagtctggctcaggaaaatcccaa
acggcattcgctttgatggggctgctggccagtaatggccggataggtggctcggcaaag
ttcaatggccgcgaaattctgaacttacccgagaagcaattgaaccgcttgcgggctgag
gagatctcgatgatcttccaagacccaatgacttcacttaacccttatatgcgggtgggt
gagcagctaatggaagtgctgcagctgcataaaaagatgagcaagagtgaggcatttgaa
gaatcaatccgcatgcttgatgccgtgaaaatgccagaagcgcgtaagcgcatgcgcatg
tatcctcatgaattttcagggggaatgcgccagcgggtcatgatagccatggcgttattg
tgccggccgaaactgttgattgctgatgaacctacgaccgcattggatgtgaccgttcag
gcccaaatcatgacattgctgaatgaactcaagaatgagtttaataccgcaattatcatg
attactcatgacctaggggtggtcgccggtatttgtaataaagttttggtgatgtatgcc
gggcgaacgatggaatatggccaggcgcgagatgttttttatcacccaagccacccttat
tctattggtcttctgaatgccgttcctcgtcttgatgctgaaggcgactctctcacgacc
attccggggaatccacccaatttactgcgcttgccaaaaggttgtccgttccagccgcgc
tgccaatatgccatggagcgctgcgccaccacaccggcattagagcattttggtgatggc
cgtctacgtgcctgctataagccagtaggggaattagtatga
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