Yersinia hibernica LC20: LC20_02669
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Entry
LC20_02669 CDS
T03179
Name
(GenBank) type I secretion system permease/ATPase
KO
K12530
ATP-binding cassette, subfamily B, bacterial RtxB
Organism
yel
Yersinia hibernica LC20
Pathway
yel02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LC20_02669
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yel02000
]
LC20_02669
02044 Secretion system [BR:
yel02044
]
LC20_02669
Transporters [BR:
yel02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LC20_02669
Secretion system [BR:
yel02044
]
Type I secretion system
RTX toxin transporter
LC20_02669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_18
AAA_22
Zeta_toxin
DUF87
Peptidase_C39
AAA_21
AAA_5
AAA_33
Cytidylate_kin
ABC_ATPase
nSTAND3
PRK
SbcC_Walker_B
AAA_29
Pex24p
Mg_chelatase
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AHM73922
UniProt:
A0A7U4GFD0
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All DBs
Position
2314580..2316706
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AA seq
708 aa
AA seq
DB search
MENHIHSCLVCAARLLCLAGINAESVKIFSQKAAVDISAKVTFTALQQYLSQLSRATSLR
FNIKKQPLNKVKTRQLPLAFRDTQGRFIVLARLSDNQALVQYADRKKPKIINYQELSVMW
GGVVLYCRHSRFDIRWFIPVLFRHRKSLFQVLVLSMLLQFLALISPLFFQVIMDKVLVHN
ALATLDVLIIVLLVVGIYEVVLKFLREYIFSHTTTRVDILLGGKLFKHLIKLPLSYFKQR
QVGNIVARVRELDNIREFITGSALTLGVDVVFTLVLFIVMWCISPLLTLLVLATLPFYLL
LAALTTRPLQKKVEVLCGCAARNGAFLTESVSGVETVKSLALEPHMQQRWERQTRDYAQA
NFQVQNLQNLSSQCAQLLQKFAGALVIVIGAYQVMSVHLSIGQLIAFNMLAVQALMPMSK
LVDLWQQSIRAQVGLALIADILCLPVEQAAGNAAPATPINGDIALKNVTFRYRPDLNPVL
SDFSLSLRAGEHIGLVGPSGSGKSTVARLLQRLYIAEQGVINIDGWPISQFSPEYLRRNV
GVVMQESYLFNRTVRENIAHSRPTASLSEVVDAATLAGANAFILALPLGYDTLLSEGGAS
LSGGQRQRIAIARTLLANPRILIFDEATSALDDESQAEVQKNMSRIIAHRTVITIAHRLS
TVRHCHRIAVITQGRVTELAPHEQLLAQNGVYAQLWRQQADFGQEKSI
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccatattcattcttgtttagtttgtgccgcgcgcttgctttgtctcgccgga
attaatgcagaatcggtgaaaatatttagccagaaagcggccgttgatatctcagccaag
gtgacattcacagcattacagcaatatttatcccaattatcgcgcgcgacatccctccgt
ttcaacatcaagaaacaaccgttaaataaagttaaaactaggcagttgccactggcattt
cgtgatactcaaggccggtttatagtattagctcggctgagtgataatcaggcattagtg
caatacgctgacagaaaaaagccaaaaataataaattatcaagagcttagtgtgatgtgg
ggcggggtggtgctgtattgtcgccattcacgatttgatatccgctggtttattccggtt
ttattccgccaccgtaaatcactgtttcaagttttagtgttatccatgttgttgcagttc
ctggcattgatctcgccgcttttttttcaggtcattatggataaggtcttagtacacaat
gcactggcaacccttgatgtgttaattattgtattattagtggtcggtatatatgaagtg
gtgctgaagtttttgcgtgaatatatttttagccacaccacgacccgggtggatattttg
ctgggcggaaagctatttaaacacttaattaagttaccactcagttattttaagcaacgc
caggtggggaatattgtcgccagagtgcgggaattagacaatattcgtgaatttattacc
ggttcggccctgaccttaggtgtggatgtggtttttaccttggtattatttatcgtcatg
tggtgtatttcgccgctactgacattattggtcttggcgacgctaccgttttatctgtta
ttagccgccttgaccacgcgcccgctgcaaaaaaaagtcgaagtgttgtgcggctgcgcg
gcccgcaatggcgcatttttgaccgaaagcgtctcaggtgttgaaacagtaaaaagcctg
gcattagagccacacatgcagcagcgctgggagagacaaacgcgcgattatgcccaagcc
aattttcaagtacaaaatctgcaaaacctcagcagccaatgcgctcaattattgcaaaaa
ttcgccggggcgctggtgatagtgattggggcatatcaagtgatgtctgtgcacctgagt
atcgggcaattaattgcctttaacatgctggcggttcaagcattaatgccgatgagtaag
ctggttgatttatggcaacagagcatccgtgcgcaggttgggctggcgctaatcgccgat
attttgtgcttgccagtcgagcaagcggcgggaaacgcagcgcctgccaccccgattaac
ggtgatatcgccctgaaaaatgtgacttttcgctatcgccccgaccttaacccggtgcta
tctgatttttcattgtcactgcgtgccggggagcatatcgggctggtggggccatcgggg
tcaggtaaaagcactgtcgcgcggctgttacaacgcctttatattgctgaacaaggggtt
atcaatattgatggatggccaataagtcagttctcgcctgaatatctgcggcgtaacgtg
ggggtggtgatgcaggaaagttacctgtttaaccgcacggtccgtgaaaatattgcccat
tcgcggccaacagcttcgctcagtgaggttgtcgacgccgccacactggctggggctaac
gcctttattctggctttgccgctcggctacgacaccctattgtccgagggcggagcctct
ctttctggggggcaacgtcaacgtattgcaattgcccgcaccctgctggccaatccccgc
atcttgatttttgatgaagcaaccagcgcactggatgacgagtcacaagctgaagtacag
aaaaatatgtcgcgcattatcgctcatcgcacagttatcaccatcgcccatcggctctca
acggtgcgccattgccaccgtattgcggtgataactcaaggccgggtgactgagctggcg
cctcatgaacagttgctggcgcaaaatggcgtttatgcccagctgtggcgacagcaagcc
gatttcggtcaggagaaatcaatatga
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