KEGG   Yersinia hibernica LC20: LC20_03403
Entry
LC20_03403        CDS       T03179                                 
Symbol
helD
Name
(GenBank) DNA helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
yel  Yersinia hibernica LC20
Brite
KEGG Orthology (KO) [BR:yel00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:yel03400]
    LC20_03403 (helD)
Enzymes [BR:yel01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LC20_03403 (helD)
DNA repair and recombination proteins [BR:yel03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    LC20_03403 (helD)
SSDB
Motif
Pfam: Helicase_IV_N UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_30 AAA_12 ResIII DEAD
Other DBs
NCBI-ProteinID: AHM74656
UniProt: A0A7U4K1M9
LinkDB
Position
complement(2910073..2912127)
AA seq 684 aa
MELKATSFGKHLAQHPYNRVRLLNAGIEVCGDKHQYLIPFNQLVNIQCKRGIVWGEMEFE
LPNQQVVRLHGTEWQETQRFYHHLLGIWQQWSEEMSLVCAAVLHKQVELIKRIEQQDKWF
KRSELNQLQASIREAFTSLPMPVQRLTEFESCRADYELCLRWLQQGNRSVDHRNQQWTNR
MLEEYQDFFQSVETSPLNESQSRAVINGEDSVLVLAGAGSGKTSVLVARAGWLLRRNEAL
AEQILLLAFGRQAADEMNSRIQQRLGVEDIQAKTFHALALQIIQQGSRKTPVISQLESDS
QARRSLLIKHWQQQCSEKKAQAKGWREWLTDELEWDVEDGDFWQDKRLAARLAGRLERWL
GLMRMHGGSQAEMIEQADEEVRDLFQKRIRLMAPLLKAWKTALKEEGAVDFAGLIHQAVN
LLEKGRFVSPWKHILVDEFQDISPQRAMLLTALRKQNKQTCLFAVGDDWQAIYRFSGAEL
SLTTAFNQNFGEGAECALDTTYRFNDRIGEIANRFIQQNPYQLKKPLNSLSKGNKKSVII
LPSEQLESLLDKLSGFVKADERILILARYHHLRPDILPKAATRWPKLTIDFMTIHASKGQ
QADYVIIAGLHQGGDGFPAVARESILEDVLLPAPEEFPDAEERRLLYVAMTRAKHQVWLL
QDTANPSIFVSQLSELGVPTQRKP
NT seq 2055 nt   +upstreamnt  +downstreamnt
atggaacttaaagcgacatcttttggcaagcatttggctcaacacccttacaatcgggtt
cggttgctgaatgcgggcatcgaagtatgcggtgataaacaccaatacctgattcctttt
aatcagttggttaacattcaatgtaagcgcggtattgtttggggtgagatggagtttgag
ctgccaaatcaacaagttgtgcgtttacacggcaccgaatggcaggaaacgcaacgtttc
tatcatcatttactgggcatttggcaacaatggagtgaggagatgagcttggtttgtgcg
gcagttttgcataaacaagttgaattaattaagcgaattgagcaacaggataaatggttt
aaacgcagtgagttaaatcagctacaagcatctatccgtgaggctttcacatcacttccg
atgccggttcagcgcttaaccgaatttgagtcttgccgcgcagattatgagctttgtctg
cgctggttacagcagggcaaccgcagtgttgaccatcgcaatcaacaatggacaaaccgc
atgctggaggaatatcaagatttcttccagagcgtagaaacctcaccgcttaatgaatcg
caaagtcgcgcagttatcaatggcgaagattcggtattggtgttggccggtgcgggcagt
ggcaaaacctcggtactggttgcccgtgcgggctggctattgcgtcgtaatgaagcactg
gcagagcaaattttgctgctcgcctttggccgccaggccgctgatgaaatgaatagccgt
atccagcaacggctcggtgtcgaagatattcaagctaaaactttccatgcgcttgctttg
cagataatccagcaaggcagccgaaaaacgccggtgataagtcagcttgaatcagacagt
caggccaggcggtcactgctgattaagcattggcaacagcaatgcagcgagaaaaaagcc
caggctaaagggtggcgagaatggttaactgacgagctagaatgggatgttgaagacggt
gatttctggcaggataagcgccttgcggcccgccttgctgggcgacttgagcgctggttg
gggttgatgcgcatgcacggtggcagtcaggccgaaatgattgagcaggctgatgaagaa
gtgcgtgacctgtttcaaaaacgtatacgactgatggccccgttactgaaagcatggaaa
acggcgctgaaagaagagggcgccgttgatttcgctgggctaattcatcaggccgtcaac
ttgctggagaaagggcgatttgtcagtccctggaagcacattcttgttgatgagtttcag
gatatctcgccgcagcgggccatgttgctgactgccttgcgtaagcaaaataagcaaacc
tgcctgtttgcggttggtgacgactggcaggctatttatcgtttcagtggcgctgagctt
tcgctgacaactgcgtttaaccagaattttggtgagggcgctgaatgtgcattggatacc
acttatcgctttaatgacaggattggtgaaattgcaaaccggtttatccagcagaaccca
taccaactgaaaaagcccctgaatagcttgagtaaaggaaataaaaagtcagtcattatt
ttgccaagtgaacaattggagtcactgctcgataagttaagtggttttgttaaggctgat
gaacgcattcttattttggcccgttatcaccatttacgccccgatattttgccaaaagca
gccacgcgctggccaaagttaaccattgattttatgacgattcatgccagtaaaggtcaa
caggcagattatgtgattatcgctggtttacatcaggggggggatggtttcccggcggtg
gctcgggagtcaattctggaagatgtattgctacccgcgcctgaagagttccctgatgcg
gaagagcggcgtttgttgtatgtggcaatgacgcgagcaaaacatcaggtctggttactg
caagacacggctaatccgtccatttttgttagtcaacttagcgagttgggtgtgccgact
cagcgaaaaccctaa

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