Yersinia hibernica LC20: LC20_03480
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Entry
LC20_03480 CDS
T03179
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
yel
Yersinia hibernica LC20
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yel03009
]
LC20_03480
Ribosome biogenesis [BR:
yel03009
]
Prokaryotic type
ribosomal protein modification factors
LC20_03480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
AHM74733
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Position
2998064..2999830
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AA seq
588 aa
AA seq
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MTQTFIPGKDAALEDSISRFQQKLSDLGFNIEEASWLNPVPHVWSVHIRDRDCPLCFTNG
KGASKKAALASALGEYFERLSTNYFFADFYLGKAIAEGDFVHYPNEKWFPIPEDDLLPEG
ILDQRLLAFYDPEQELLASDLVDLQSGNATRGICSLPFTRQSDLETVYIPMNIIGNLYVS
NGMSAGNTANEARVQALSEVFERSVKNRIIAESISLPEIPAEVLNRYPGVVEAIAKLEEE
GFPILSYDASLGGAYPVICVVLFNPSNGTCFASFGAHPDFGVALERTVTELLQGRSLKDL
DVFTAPTFDDEEVAEHTNLETHFIDSSGLISWDMFKEDADYPFVDWSFKGTTEAEFATLM
AIFKQEDAEVYIADYEHLGVYACRILVPGMSDIYPAEDLLMANNTMGVHLRDTLLALPDS
DWQPEQYLELIQKLDDDGLDDFARVRELLGIASGKDNGWYTLRVGELKSMLALAGGDLEQ
ALIWVEWTQDFNSSVFTAKQANYYRCLQTLLLLTQEPERDAAQYYGAFVKMYGQEAVDAA
SAAIAAEERFNGLFSVDADLKALPAHQALLGAYAKLQAAKRRYWAKSE
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgacccaaacctttattcccggcaaagacgccgcgctggaagactccatctcccgcttt
cagcaaaaactgagcgacctcggttttaatattgaagaagcctcctggctgaacccagtt
cctcacgtttggtcggtacatatccgcgaccgtgactgcccgctgtgctttaccaacggc
aaaggtgccagcaagaaagcggcactggcctcggccttgggtgaatatttcgagcgtttg
tccactaactatttcttcgccgatttctatctgggcaaagcgattgcggagggtgatttc
gttcattatccgaatgaaaaatggttccctatccctgaagatgacttactgccagagggg
attttggatcagcgtctgttggcgttttacgatccagagcaagagttgctggccagtgat
ctggtggatttacagtcaggtaatgccacgcggggtatctgctcattgcctttcacccgc
cagtcagatttagaaaccgtctatattccaatgaatattatcggcaatctgtatgtttca
aacggcatgtctgctgggaacaccgctaacgaagcccgtgtgcaagcattgtctgaagtg
tttgaacgttcggtgaaaaatcgcattattgccgagtccatcagcttgccggaaatccct
gcggaggtgttaaatcgctatccgggggtggtggaagctatcgccaaactggaggaagaa
ggtttcccaatcctctcttacgatgcttctttgggtggcgcttatccggtcatctgtgtg
gtgctgtttaacccctcaaatggcacctgttttgcctcgtttggtgcacatccagacttt
ggtgtcgcccttgagcgtaccgtgaccgagttattgcaaggccgtagcctcaaagattta
gatgtgtttactgcgcccacctttgatgatgaagaagtggctgagcataccaatctggaa
acccactttatcgattcaagcggcttaatcagctgggatatgtttaaagaagatgccgac
tatccatttgtagattggagttttaaaggcaccactgaagcagagttcgccaccttgatg
gccatcttcaaacaggaagatgccgaagtgtatatcgctgattatgaacatcttggcgtg
tatgcttgccgtattctggtgccagggatgtccgatatttacccggcagaagatttgctg
atggccaataacaccatgggcgtgcatctgcgtgacaccctactggccctgccagacagt
gattggcaaccagaacagtatttagaactcattcagaaattggatgacgacgggctggac
gattttgcccgggtgcgcgagctactcgggatcgcctcgggcaaggataacggctggtat
accttgcgcgtgggtgagctgaaatccatgctggcattggcgggtggtgatttggagcag
gcgctgatttgggttgagtggacacaagatttcaactcatcggttttcactgcgaaacaa
gcaaactattaccgttgcctgcaaaccctgctgttgctgactcaggagccagagcgtgat
gccgcacagtattatggcgcgtttgtgaaaatgtatggccaagaagcggtagatgccgcg
tctgccgccattgccgctgaagagcgttttaacggcttattcagtgttgatgccgatctc
aaagccctgccggcacatcaggcattgctgggtgcttatgctaaattgcaggcggctaag
cgccgttattgggccaaaagcgagtaa
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