Yersinia hibernica LC20: LC20_03731
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Entry
LC20_03731 CDS
T03179
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
yel
Yersinia hibernica LC20
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yel03016
]
LC20_03731
Enzymes [BR:
yel01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LC20_03731
Transfer RNA biogenesis [BR:
yel03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LC20_03731
Prokaryotic type
LC20_03731
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AHM74984
UniProt:
A0A7U4GGV3
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All DBs
Position
complement(3224771..3225613)
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AA seq
280 aa
AA seq
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MSELELAQPEHAVAEAAGIKIALGIEYNGSRYFGWQRQQEVISVQGCLEVALSKVANEPI
GVFCAGRTDAGVHATGQVVHFVTTAERKDAAWTMGVNSHLPPDIAVRWIKTVDDDFHARF
SATARRYRYIIFNHRYRPAVLAQGVTHCYMPLDAEKMEQAAQCLLGENDFTSFRAVQCQS
RTPWRNVKHIKVTRHGAYIVVDIKANAFVHHMVRNIVGSLIEIGCGNQSVTWMAELLALK
DRTRAAATAKAEGLYLVAVDYPEHFALPQAPMGPLFLADD
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacttgagttggctcagccagaacatgccgtggctgaagccgcgggtattaaa
atcgcgctgggcattgaatataacggcagccgctattttggttggcaacgccagcaagaa
gttatcagtgtgcaggggtgcctggaagtcgcgctatcaaaagtggccaatgaacctatc
ggcgtgttttgtgccggccgcactgatgccggtgtacatgccaccgggcaggtagtccat
ttcgtcaccaccgctgagcgcaaagatgcggcgtggaccatgggggtgaatagtcatttg
ccgccagatattgccgtgcgttggataaaaacggttgatgatgatttccatgcccgtttc
agtgccaccgctcgccgctaccgctacattatttttaaccatcgctatcgcccggcggtc
ttggcgcaaggggtaacccattgttatatgccgctggatgccgaaaaaatggaacaggct
gcgcaatgtttgctcggtgagaatgattttacctcgtttcgtgcggtacagtgccagtcg
cgtaccccatggagaaatgtaaaacatatcaaagttacccgacatggcgcatatatcgtg
gtagatatcaaggccaacgcatttgtacatcacatggtgcgtaatatcgtcggcagtttg
attgagattggttgcggtaatcagagtgttacctggatggcggagttactggcgctgaaa
gaccgaactcgtgctgcggcgacggcaaaagcggaggggttatatttagtcgcagttgac
tatcctgaacactttgcgttgccacaagcgccaatggggccactttttttagcggatgat
tga
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