Yersinia hibernica LC20: LC20_03775
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Entry
LC20_03775 CDS
T03179
Symbol
fadJ
Name
(GenBank) fatty acid oxidation complex subunit alpha FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
yel
Yersinia hibernica LC20
Pathway
yel00071
Fatty acid degradation
yel00280
Valine, leucine and isoleucine degradation
yel00310
Lysine degradation
yel00362
Benzoate degradation
yel00380
Tryptophan metabolism
yel00410
beta-Alanine metabolism
yel00640
Propanoate metabolism
yel00650
Butanoate metabolism
yel00907
Pinene, camphor and geraniol degradation
yel00930
Caprolactam degradation
yel01100
Metabolic pathways
yel01110
Biosynthesis of secondary metabolites
yel01120
Microbial metabolism in diverse environments
yel01200
Carbon metabolism
yel01212
Fatty acid metabolism
Module
yel_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
LC20_03775 (fadJ)
00650 Butanoate metabolism
LC20_03775 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
LC20_03775 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LC20_03775 (fadJ)
00310 Lysine degradation
LC20_03775 (fadJ)
00380 Tryptophan metabolism
LC20_03775 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
LC20_03775 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LC20_03775 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LC20_03775 (fadJ)
00930 Caprolactam degradation
LC20_03775 (fadJ)
Enzymes [BR:
yel01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
LC20_03775 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
LC20_03775 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
LC20_03775 (fadJ)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AHM75028
UniProt:
A0A7U4GGV6
LinkDB
All DBs
Position
complement(3260657..3262816)
Genome browser
AA seq
719 aa
AA seq
DB search
MFTLSIRPDNIGVITIDVVGDKVNTLKAEFAEQITAILQQAQALNQLQGLVIISDKPDSF
IAGADITMIAACRTAQDARALAQKGQSVLAQIAAFPIPVVAAIHGACLGGGLELALACHS
RICSQDDKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSRALDMILTGKQIRARQALKMGLV
DDVVAPEILLDVAVQRAKAGWLDKPVVPWQERLLSGPLGKALLFNIVRKKTLAKTKGHYP
AAERIIEVVRKGLDHGGPAGYEAEAKAFGELAMSPESAALRSLFFATTALKKETGSQAQP
RAIHRVGVLGGGLMGGGIANVTATRAGLPVRIKDINPTGINQALKYTWDALGKRVRSKRM
RPAQRQRQMMLISGSTDYCGFGNVDIVIEAVFEDLSLKQQMVADIEHFAAPHTIFASNTS
SLPISDIAAQAQRPEQVIGLHYFSPVDKMPLVEVIPHAKTSEETIATTVALARKQGKTAI
VVADRAGFYVNRILAPYINEAARCILDGEPIDSVDKSLVDFGFPVGPITLLDEVGIDVGT
KIMPILVEKLGPRFAAPPSFEVILKDGRKGRKNGRGFYLYPAKSTGFTWKRNPAKQVDTS
VYTLLGVSPKAHIESAVIAQRCIMMMLNEAARCLDEAIIRNPRDGDIGAVFGIGFPPFLG
GPFRYMDSLGAEKVVKTLKLLAQQYGERFEPCPLLVTMAQQQQTFYPSENSTDEGAVNA
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
gtgttcacactcagcatccggcccgataatatcggcgttatcaccatcgatgttgttggt
gataaggtgaataccttaaaagctgaatttgcagaacaaatcactgcaatattgcaacaa
gcacaggctttgaatcaattacagggcttagtgattatttcggataaaccggactctttt
atcgccggtgctgatatcaccatgatagccgcttgccgtactgcgcaggatgctcgtgct
ctggctcagaaagggcaatccgttctggcgcaaatcgccgcattccccatccctgtcgtc
gcggctattcacggggcttgccttggcggtggcctggaactggcgctggcatgtcatagc
cgtatttgctcgcaagatgataaaaccgtgctcggtttgccggaagtacagctcgggctg
ctaccgggttccggtggcacccagcgcctgccgcgtctggtaggggtgagtagggcgctg
gacatgatattgacgggcaagcaaatccgtgcgcgtcaggcactgaaaatggggctggtg
gatgacgtcgttgcaccggagattttgcttgatgtggctgtccaacgggcaaaagcgggt
tggcttgataagccagtcgtgccttggcaggagcggttgctcagtggcccattaggtaag
gcattgttatttaacattgtgcgcaagaaaacgctggcgaagaccaaggggcactatccg
gcggccgaacgtattattgaggtggtgcgtaaagggctggatcacggcgggccagccggt
tatgaagccgaagccaaagcttttggcgaactggcgatgtcccctgagtcagccgcatta
cgcagtttgttttttgcaaccaccgcgctgaagaaagaaaccggcagtcaagcacaacca
cgtgctattcatcgcgtcggagtactaggcggtggtttgatggggggcggtattgccaat
gtaaccgcaacgcgtgccggtttaccggtacgcattaaagatatcaacccgacggggatt
aatcaggcgctgaaatatacctgggatgctttaggcaagcgggtgcgcagcaagcggatg
cgcccggcacagcggcaacggcagatgatgttgatttccggcagcaccgattattgtggt
tttggcaatgtggatatcgtcattgaggcggtatttgaagatttatcgttgaagcaacaa
atggtcgccgatattgagcacttcgccgcgccgcacactattttcgcctccaatacatcg
tcactgcccatcagcgatattgctgcgcaagctcagcggccagagcaggttatcggcctg
cattactttagtccggtggataaaatgccgctggtagaagttattccgcatgctaaaacc
agcgaagaaactatagcaacaaccgtagctttagcgagaaaacaagggaaaacggcgatt
gtggtggcagaccgggccggattctatgtaaatcgtattttggcaccatacatcaacgaa
gccgcccgctgtattttagatggtgaacccattgactcagtagataagtccttggtggat
ttcggcttcccggttggcccaataaccttgttggatgaggttggaattgatgtcggtacc
aagataatgcccattctggttgaaaagttaggcccgcgctttgccgcaccgccttcattt
gaggtgatcttgaaggatgggcgcaaagggcgtaaaaatggccggggcttctatctttat
cccgctaaaagtaccggctttacgtggaaaagaaacccggctaagcaagttgataccagc
gtttataccttgcttggtgtcagtccgaaggcccatatcgagtcagccgtgatagctcag
cgttgcatcatgatgatgctgaatgaagccgcgcgctgcctggatgaagctattatccgt
aacccgcgtgatggggacattggcgcggtatttggcattgggttccctccgttcttaggc
gggcctttccgctacatggacagcttgggtgctgaaaaagtggtgaaaacgcttaagtta
ctcgcgcagcagtatggtgagcgttttgagccttgcccattattggtgacgatggcgcag
caacagcaaacgttttatccatcagaaaacagcaccgatgaaggggccgtcaacgcctaa
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