Yersinia hibernica LC20: LC20_04097
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Entry
LC20_04097 CDS
T03179
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
yel
Yersinia hibernica LC20
Pathway
yel00550
Peptidoglycan biosynthesis
yel01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LC20_04097
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
yel01003
]
LC20_04097
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
yel01011
]
LC20_04097
Enzymes [BR:
yel01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
LC20_04097
Glycosyltransferases [BR:
yel01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
LC20_04097
Peptidoglycan biosynthesis and degradation proteins [BR:
yel01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
LC20_04097
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
BiPBP_C
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
AHM75350
UniProt:
A0A7U4GHA6
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All DBs
Position
complement(3526879..3529218)
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AA seq
779 aa
AA seq
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MMKRTFFARHRRKLWILALIAVLSPVVLWLADKRWPLPLTEAQVARVVVAEDGTPLWRFA
DADGVWRYPVTLSEVSPYYLQALLTFEDRWFYQHPGVNPLALIRAAWQDLRAGKILSGGS
TLSMQVARLIDPHPRTFAGKLRQVWRTAQLEWHFSKAQILEIYLNRAPFGGTLQGIGAAS
WTYLGKPPSQLTPAEAALLAALPQAPSRLRPDRYPLRAKEARDKVLNRLADYQVWPTAQV
TDIKQEEIWLAPRQVPQLAPLLARRLISGNQREVIKTTLDAGLQRQLEDMANGWRHQLPE
KTSLGLLVVDHTTMNVSAYLGSVDFQDNSRFGHVDMVSAWRSPGSTLKPFLYAMALDDGL
IHAESLLQDVPRRFGDYRPGNFDTGFHGPVSASEALVRSLNLPAVQLLEAYGPKRFTANL
RNAGLNLRFPLHSEPSLAVILGGTGSRLDQLVAAYSAFARGGMAASLRFEPQQQIQERRL
FSPGAAWITRRIMAGEARPLPDDILPASVPLAWKTGTSYGYRDAWAIGINARYTLGVWVG
RPDGTPVAGQFGFATAVPILNQVNNLLMTRLQQNGRQLPLDPRPSSVTREEICWPGGQPL
AMGDSNCRQRRQSWVLDGTLPPTLMAAGQENIQGSQLTVWLNSQQQRVAADCPGATPAAL
ILWPLPLEPWLPVTERRSHRLPAASRECPPPIDMNVAPLLILGIRDGAVVKRLPGQPRLD
LRLAVQGGYGQHWWFLNGEQVAITGDNQSWTQTLSQPGRYQLNVLDESGQVSNLTFRLD
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
ttgatgaaacgaacgttttttgctcgtcatcgccgcaaactttggatattggcgttgatt
gcggtgctctctccggtggtattatggctggcggataagcgttggccgctgccattgact
gaggctcaggttgcacgggtggtcgtggctgaagatggcacgccgttatggcgttttgct
gatgctgacggggtgtggcgctatcccgttaccctgtcagaggtttccccttattatctg
caagcgctgctgaccttcgaagaccgctggttttatcagcatcccggtgtgaacccattg
gcgctgattcgtgccgcttggcaggatttgcgtgcgggtaaaattttgtctggcggcagt
acattatcgatgcaggttgcccgcctgattgacccacatccccgcacattcgccggtaag
ttgcgccaagtgtggcgaacggctcagctggagtggcacttctccaaagcacaaattctc
gaaatctatcttaatcgcgccccatttggcggcacgttgcaagggattggcgctgccagt
tggacttatctgggtaagcctccctctcaattaacccccgcagaagccgcgttactggcg
gcattaccacaagctcccagccgattacggccggaccgctacccgctacgcgctaaagag
gctcgcgataaagtgttgaatcggctggcggattatcaagtgtggcctacagcgcaagtt
actgatattaaacaagaagaaatctggctggcaccgcgtcaggttccccagttagcgcca
ttactggcccggcgcttaatcagtggcaatcagcgggaagtgattaaaaccacattggat
gctgggttacagcggcaattagaagatatggccaacggctggcgtcaccaattacccgag
aaaacttcactggggttgctggtcgtcgaccacaccaccatgaatgtgagtgcttacctc
ggctcagtggattttcaggataatagccgcttcggccatgtcgatatggtgagtgcctgg
cgttcaccggggtcgacactgaaaccatttctgtatgccatggcattggatgatggccta
attcatgcagaatcactgctacaagatgtgccgcgccgttttggtgattatcgccccggc
aattttgataccggatttcatggcccggttagcgccagcgaggcattggtgcgctcactg
aatttaccggcagtacaattactggaagcttatggcccaaaacgctttaccgctaatcta
cgcaatgctggtctgaatttacgttttcccctgcacagtgaacccagcctggcggttatt
cttgggggaaccggttcacggctggaccaattagtggcggcgtacagcgcctttgctcgt
ggcggaatggcggctagcttgcgtttcgaaccccagcagcagatacaagagcggcggtta
ttttcaccgggagcggcatggattacccggcgcatcatggcgggagaggcccggccattg
ccggatgatattttaccggccagtgtccccttggcgtggaaaaccggcaccagttatggc
tatcgtgatgcatgggcgataggtattaatgcgcgttatacccttggcgtgtgggttggg
cggcctgatggaaccccggtcgccggtcaatttggtttcgccactgcggtgccaatcctt
aaccaagtcaacaacttgttgatgacgcgcttacagcaaaatggccgccagttacccctt
gatcctcgcccctcatcggtcactcgggaagagatttgttggccgggcggccaaccattg
gccatgggtgacagtaactgccgacaacggcgacaaagttgggtgcttgatggcactctc
cccccgactctgatggccgcggggcaggagaatattcaaggtagccaactcactgtttgg
ctaaattcacagcaacagcgcgtcgcggctgattgccctggtgctaccccggcagcactc
attttatggccattgccacttgaaccttggttacccgtaaccgaacgccgcagtcaccgc
ttgcctgcggctagccgcgaatgcccgccacccattgatatgaatgtggccccgctgctg
attttgggcatccgtgacggtgctgtggtgaagcggttgccgggtcaaccgcgcctcgac
cttcgcttggcagtacagggcggctatgggcagcattggtggttcctcaatggtgagcaa
gttgccatcactggggataatcaatcatggactcagacattgtctcagcccggccgttat
caactcaatgtattagatgaaagtggtcaagtgagtaatttaacatttcgcttggactag
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