KEGG   Yersinia hibernica LC20: LC20_04152
Entry
LC20_04152        CDS       T03179                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
yel  Yersinia hibernica LC20
Pathway
yel03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:yel00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    LC20_04152
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:yel03019]
    LC20_04152
   03009 Ribosome biogenesis [BR:yel03009]
    LC20_04152
   03036 Chromosome and associated proteins [BR:yel03036]
    LC20_04152
Enzymes [BR:yel01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     LC20_04152
Messenger RNA biogenesis [BR:yel03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     LC20_04152
Ribosome biogenesis [BR:yel03009]
 Eukaryotic type
  90S particles
   RNase
    LC20_04152
 Prokaryotic type
  rRNA processing factors
   LC20_04152
Chromosome and associated proteins [BR:yel03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     LC20_04152
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DSRM_2 DND1_DSRM RM44_endonuclase
Other DBs
NCBI-ProteinID: AHM75405
UniProt: A0A7U4GHD6
LinkDB
Position
complement(3581135..3581815)
AA seq 226 aa
MNPIVINRLQRKLGYTFQQQELLLQALTHRSASSKHNERLEFLGDSILSFVIANELYRRF
PRVDEGDMSRMRATLVRGNTLAEMAREFDLGECLRLGPGELKSGGFRRESILADTVEALI
GGIFLDSDIHTIERLILDWYRSRLEEISPGDKQKDPKTRLQEYLQGRHLPLPSYLVVQVR
GEAHDQEFTIHCQVSGLNEPVIGTGSSRRKAEQAAAEQALKQLELE
NT seq 681 nt   +upstreamnt  +downstreamnt
atgaaccccatcgtaataaataggctacagcggaagctgggctacacttttcaacagcag
gagctcttgctgcaagcactgactcatcgtagcgccagtagcaaacataatgagcgtttg
gagttcctgggtgactctatattaagtttcgttatcgccaatgagttgtatcgccgtttc
ccacgagttgatgaaggggatatgagccggatgcgagcaacattggtcagaggaaacaca
ctcgccgaaatggcccgtgagtttgacctcggtgaatgtttacgtcttgggccgggtgaa
ttgaaaagtggtggtttccgccgtgaatcaattttggcagatacagtcgaagctttaatt
ggcggtatcttcttagacagcgatattcatacgattgaacggctgattcttgactggtat
cgcagtcgcttagaagaaatcagcccaggtgacaagcagaaagacccaaaaacgcgcctg
caagaatatttacagggccgtcatctgccattaccttcatatctggttgtgcaggttcgt
ggtgaagcacatgatcaggaatttactatccactgccaggtgagtggcttgaatgaaccg
gttatcggtaccggctcaagtcgccgtaaagctgagcaggcggcagcggaacaagcgctg
aaacagttggagcttgaatga

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