Yersinia hibernica LC20: LC20_04164
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Entry
LC20_04164 CDS
T03179
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
yel
Yersinia hibernica LC20
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yel03009
]
LC20_04164
Enzymes [BR:
yel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LC20_04164
Ribosome biogenesis [BR:
yel03009
]
Prokaryotic type
rRNA helicases
LC20_04164
BRITE hierarchy
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
AAA_22
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AHM75417
UniProt:
A0A7U4K2C0
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All DBs
Position
3591601..3592917
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AA seq
438 aa
AA seq
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MTVTNFSELDLDERLIDALRDKGYERPTAIQAAAIPPAMDGRDVLGSAPTGTGKTAAFLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADQARELAKHTQLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETISAETRW
RKQTLLFSATLEGDAIREFAERILTEPVELEADPSRRERKKIQQWYYRADNIEHKTALLV
HLLKQPEVQKSIIFVRTREKVHQLVSWLREAGINAWFLEGEMVQAKRTEAVIRLSDGRVN
VLVATDVASRGLDIDDISHVFNFDLPLTADVYLHRIGRTGRAGRKGVAISLVEAHDHLLL
GKIGRYLKEPLKPRVVDELRPTSKAPSEKTTGKPSKKVLAKRKELKEASKEKAKVKVRHR
DAKNVGKRRQPKDKPDTK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaaccaatttttccgaactcgatctcgatgaacgcctgattgacgcactgcgc
gacaaaggctatgagcgcccaacggccattcaagctgcggctattccgccagctatggat
ggccgtgatgtattgggttcggcaccaacaggcacaggcaaaactgccgcctttttgctg
ccagccttgcagcatttgctggattttccacgcaaaaaatctggcccgccaagaattttg
atcctgacgccaacccgcgaactagccatgcaagtggcagaccaagcccgtgagttggct
aaacatacccaactggatatcgcgacgattaccggtggtgtggcttatatgaaccacgcg
gaagtctttagtgagaatcaggatatcgtggtggcgaccactggccgcttgctgcaatac
atcaaagaagaaaattttgactgtcgggcagtagaaacgctgattctggatgaagctgac
cgcatgctggatatgggcttcgcacaagatattgaaaccatttcagcagaaacgcgttgg
cgcaagcagaccctactcttctccgccacactagagggtgatgctatccgtgaatttgcg
gaacgcatcctgactgagccggtagaactggaagccgacccatcacgccgcgaacgtaaa
aaaattcaacaatggtattaccgcgcagataacattgaacataaaaccgctttgctcgtg
catttactcaagcaaccggaagtacagaaatccattattttcgtccgtacccgtgaaaag
gtgcatcaactggtcagttggctgcgtgaagctgggattaacgcctggttccttgagggc
gaaatggttcaggccaaacgcaccgaagcggtgatacgtttaagtgatggccgggttaac
gtcctagtggcgaccgatgtggcgtcgcgtggattggatatcgacgatatcagccacgtt
ttcaactttgacctgccactgaccgccgacgtctatctgcaccgtattggccgtaccggc
cgtgctgggcgtaaaggcgtggctatctccctagttgaagcgcatgaccacttattactg
ggcaaaattggccgttatctgaaagaaccgctgaagccacgtgttgttgatgagttacgc
ccgaccagcaaagcaccaagcgaaaaaaccaccggcaaaccgtctaaaaaggttttagcc
aagcgcaaagagctaaaagaagccagcaaagaaaaagccaaggttaaggttcggcatcgc
gatgctaaaaatgtgggtaagcgccgtcaacccaaagataaacctgataccaagtag
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