Yersinia hibernica LC20: LC20_04180
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Entry
LC20_04180 CDS
T03179
Name
(GenBank) modification methylase SinI
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
yel
Yersinia hibernica LC20
Pathway
yel00270
Cysteine and methionine metabolism
yel01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
LC20_04180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yel03000
]
LC20_04180
03032 DNA replication proteins [BR:
yel03032
]
LC20_04180
03036 Chromosome and associated proteins [BR:
yel03036
]
LC20_04180
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
yel02048
]
LC20_04180
Enzymes [BR:
yel01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
LC20_04180
Transcription factors [BR:
yel03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
LC20_04180
DNA replication proteins [BR:
yel03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
LC20_04180
Chromosome and associated proteins [BR:
yel03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
LC20_04180
Prokaryotic defense system [BR:
yel02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
LC20_04180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
HTH_17
HTH_59
Rv2175c_wHTH
HTH_28
AbiEi_4
Motif
Other DBs
NCBI-ProteinID:
AHM75433
UniProt:
A0A7U4GHE7
LinkDB
All DBs
Position
complement(3603055..3604422)
Genome browser
AA seq
455 aa
AA seq
DB search
MSTTITVNEAATILGISPQRVRTLCRNGEALEARQSGKTWLINEDSVKRLKSQSQLDDEM
SRLEIRRPIALSFFSGAMGMDIGLEKAGFHTLLACEIDKSARKTIKKNKPDIALIGDIRD
YSAQQIIEHAGLELNDEVDLIMGGPPCQAFSTAGKRLGLEDDRGNVFLKYLEVVFEIKPK
YFVIENVRGLLSAPLKHRPHNERGIDFPPLEKEEYPGGVLNYILRIIKSSGYSCSFELYN
SANFGVPQVRERIVMICSRDGRKVPYLEPTHSQNGENGLPKWKTFSEAVSSLEGTQHTHI
SFPEKRIKYYKLLKPGQYWKNLPIEMQKEALGKSFFSGGGKTGFLRRLSWDKPSPTLVTH
PAMPATDLAHPVELRPLSIEEYKKVQQFPDEWVIEGKILDQYKQLGNAVPIGLGYAIGNN
ILKFERGMAIKNYDGFKYSRYKNTSDIEFEKFFNK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaccacaattacagttaatgaagcagctacaatcctaggtatttcaccgcagcga
gttagaaccctttgccgaaatggagaggcgttagaagcacgccaatcaggtaaaacatgg
ttgattaatgaagatagtgttaaaagactaaaatcacaatctcaactagatgacgagatg
agcagacttgagattcggcgacctattgcattgagtttttttagtggtgctatggggatg
gatataggtttagaaaaagcaggtttccatactttacttgcttgtgaaattgataagagt
gcgcgcaaaacaataaagaaaaacaagcctgatatagcattaataggggatatacgtgat
tatagtgctcagcaaataatagagcacgcagggctcgaacttaatgatgaggttgatctt
attatgggcgggccaccatgtcaggctttttctaccgcaggaaagagacttggccttgag
gatgaccgagggaacgtcttcttgaaatatctagaagttgtttttgaaattaagcccaaa
tattttgttattgagaatgtcagaggattattatcggctccattaaagcacaggccacat
aatgagcgtggtatagattttcctccacttgaaaaagaagaatatcctgggggggtttta
aattatattttgcgaataataaaatcatctggatacagttgttcatttgagttgtataac
tcagcaaattttggtgttcctcaagtgagagagcgaatagttatgatttgttctcgcgat
ggaagaaaagttccttatctagaacccacacatagccaaaatggcgagaacggactgcca
aaatggaaaacattttcggaggctgtttctagtttggagggtacccagcatactcatatt
agtttcccagaaaaacgaattaaatattataaacttcttaaacccggacagtattggaaa
aacttacctatagaaatgcaaaaagaagctctaggtaaatcattcttctctggtggtgga
aaaacaggttttttaaggcgcctatcttgggataaaccatctcctacgttagtaacccat
cccgcaatgcctgcgacggatctagctcatccggtcgagttaagaccgctatctatagaa
gaatacaagaaagtacaacaatttcctgatgaatgggttatcgaaggtaagattttagac
caatataaacagcttggtaacgctgttcctattggattaggctatgctataggaaataat
atacttaaattcgaacgaggtatggctattaaaaattacgatggatttaaatactctcgt
tacaagaatacatcagatatagaatttgaaaaatttttcaataaatag
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