Yersinia hibernica LC20: LC20_04284
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Entry
LC20_04284 CDS
T03179
Symbol
recA
Name
(GenBank) recombinase RecA
KO
K03553
recombination protein RecA
Organism
yel
Yersinia hibernica LC20
Pathway
yel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LC20_04284 (recA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yel03400
]
LC20_04284 (recA)
DNA repair and recombination proteins [BR:
yel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LC20_04284 (recA)
RecFOR pathway proteins
LC20_04284 (recA)
TLS (translesion DNA synthesis) factors
Other SOS response factors
LC20_04284 (recA)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RecA_N
RecA_C
ATPase
Rad51
MT3502_N
AAA_25
ATPase_2
AAA_24
AAA_16
CbiA
AAA_22
nSTAND_NTPase5
PAXNEB
AAA_35
AAA_14
CobU
MobB
AAA
TK
NPHP3_N
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AHM75537
LinkDB
All DBs
Position
complement(3696545..3697606)
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AA seq
353 aa
AA seq
DB search
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMG
RIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQP
DTGEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLA
GNLKNANTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDVVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGININGELVDLGVKHKLIEKAGAWYSYNGDKIG
QGKANASNYLKENPAVAAELDKKLREMLLNGGNGEQPVAVAFADETDETSEEF
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggctattgatgagaataaacaaaaggcgttagcagcagcactgggccaaattgaaaag
caatttggcaaaggctctatcatgcgccttggcgaagaccgctcaatggatgttgaaacc
atctctactggttctctttctcttgatattgcattgggggcgggtggcctgccaatgggg
cgtattgttgagatttatggcccagaatcatccggtaaaacaacactgaccttacaagtt
attgctgccgcacagcgcgaaggtaaaacctgcgcctttatcgatgctgagcatgctctt
gatccaatttatgctaaaaagttaggcgtagatattgataacctgctgtgttcccagcca
gatactggcgagcaagcactggaaatttgtgacgcactaactcgctctggtgcagttgat
gtcatcatcgttgactccgtggccgcattgacaccaaaagctgaaattgagggtgaaatc
ggtgactctcacatggggcttgcagcacgcatgatgagccaggccatgcgtaaattggca
ggtaacctgaagaacgcgaataccttgttgatcttcattaaccagatccgtatgaaaatc
ggcgttatgtttggcaaccctgaaaccacaactggcggtaacgcccttaaattttatgcc
tcggtgcgtttagatattcgtcgtattggtgcagtaaaagaaggtgatgtggttgtaggt
agcgagactcgcgttaaagtggtgaaaaacaaaatagcggcaccatttaaacaagccgaa
ttccagatcctgtatggtgaaggtatcaacattaatggtgaacttgttgatttaggtgtt
aagcacaaactaattgagaaagcaggtgcttggtatagctataacggtgacaagattggt
cagggtaaagcgaatgccagtaactacttaaaagaaaacccagcggttgctgctgagttg
gataaaaaattacgtgaaatgctcctaaacgggggtaatggtgaacaacctgttgcagta
gcatttgctgatgaaacagatgaaaccagcgaagagttttaa
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