Yersinia hibernica LC20: LC20_04435
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Entry
LC20_04435 CDS
T03179
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
yel
Yersinia hibernica LC20
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yel03016
]
LC20_04435
Enzymes [BR:
yel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
LC20_04435
Transfer RNA biogenesis [BR:
yel03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
LC20_04435
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AHM75688
UniProt:
A0A7U4GHU1
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All DBs
Position
3848519..3849091
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AA seq
190 aa
AA seq
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MINTVDKTMNKRLFFALDLPDTVQQNIVQWRAAHFPPDAGRPIAAANLHLTLAFLGEVSQ
AKAQILQQQAGRISQSGFHVTLDDMGHWPNSGVIWLGCKNPARGLLQLAQLLRSQAARSG
CYQTPLPFHPHVTLFRAAIRPVAIPAKTTSESFRVDHFSLYESVFARGRTRYNIVQSWPL
TSTHRTSDAI
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgattaatactgttgataaaacgatgaataaacgcctattttttgcactcgacctgccc
gacaccgtgcagcagaacatagtgcaatggcgagcagctcatttcccgccagacgcggga
cggcccattgcggcggcgaatcttcacctgacactggcgttcctcggtgaggtcagtcag
gccaaagcacagatattgcaacaacaagccgggcgaattagtcagtcaggttttcatgta
acgctggatgatatgggccactggcccaactccggagttatctggctgggatgtaaaaat
cccgcgcgcgggctgttgcagttggctcagttgttgcgatctcaagcggcacgcagtggc
tgctaccaaacaccgctgccatttcatccccatgtcaccttgttccgcgcggctattcgc
cccgtcgctattccggcgaaaacgacgagtgaaagctttcgggtggaccatttttcgtta
tatgagtcggtatttgcacgcggtcgaacccgttataacattgtacaaagctggccattg
actagcacacacaggacttccgatgccatctaa
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