Yersinia hibernica LC20: LC20_04469
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Entry
LC20_04469 CDS
T03179
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
yel
Yersinia hibernica LC20
Pathway
yel00010
Glycolysis / Gluconeogenesis
yel00020
Citrate cycle (TCA cycle)
yel00260
Glycine, serine and threonine metabolism
yel00280
Valine, leucine and isoleucine degradation
yel00310
Lysine degradation
yel00380
Tryptophan metabolism
yel00620
Pyruvate metabolism
yel00630
Glyoxylate and dicarboxylate metabolism
yel00640
Propanoate metabolism
yel00670
One carbon pool by folate
yel00785
Lipoic acid metabolism
yel01100
Metabolic pathways
yel01110
Biosynthesis of secondary metabolites
yel01120
Microbial metabolism in diverse environments
yel01200
Carbon metabolism
yel01210
2-Oxocarboxylic acid metabolism
yel01240
Biosynthesis of cofactors
Module
yel_M00009
Citrate cycle (TCA cycle, Krebs cycle)
yel_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
yel_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
yel_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
LC20_04469 (lpdA)
00020 Citrate cycle (TCA cycle)
LC20_04469 (lpdA)
00620 Pyruvate metabolism
LC20_04469 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
LC20_04469 (lpdA)
00640 Propanoate metabolism
LC20_04469 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LC20_04469 (lpdA)
00280 Valine, leucine and isoleucine degradation
LC20_04469 (lpdA)
00310 Lysine degradation
LC20_04469 (lpdA)
00380 Tryptophan metabolism
LC20_04469 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LC20_04469 (lpdA)
00670 One carbon pool by folate
LC20_04469 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
yel04147
]
LC20_04469 (lpdA)
Enzymes [BR:
yel01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
LC20_04469 (lpdA)
Exosome [BR:
yel04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
LC20_04469 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
GIDA
FAD_binding_2
HI0933_like
AlaDh_PNT_C
NAD_binding_8
Thi4
FAD_binding_3
DAO
Motif
Other DBs
NCBI-ProteinID:
AHM75722
UniProt:
A0A7U4GHV9
LinkDB
All DBs
Position
complement(3876751..3878178)
Genome browser
AA seq
475 aa
AA seq
DB search
MMSTEIKTQVVVLGAGPAGYSAAFRCADLGLETILVERYATLGGVCLNVGCIPSKALLHV
AKVIEEAKALAEHGIVFGEPKTDIDKVRVWKEKVINQLTGGLAGMAKGRKVKVVNGLGKF
TGANTLVVEGENGPTTITFDNAIIAAGSRPIQLPFIPHEDPRVWDSTDALALKTVPERLL
VMGGGIIGLEMGTVYHALGSKIDVVEMADQVIPAADKDVVKVFTKRISKQFNLMLETKVT
AVEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKLLDAGQAGVEVDERGFIHVDK
QLRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVISGMKHYFDPKVIPSIAYTEPEVAW
VGLTEKEAKEKGISYETSTFPWAASGRAIASDCADGMTKLIFDKETHRIIGGAIVGTNGG
ELLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEIYEGSITDLPNPKAKKK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtactgaaattaaaactcaggtcgtggtacttggggcaggcccagcagggtac
tctgctgcttttcgttgcgcggatttaggtttagaaaccattctggttgagcgttatgcc
actctcggtggtgtttgcctgaatgtgggttgtatcccttcgaaggcactgttgcacgtt
gctaaagttatcgaagaagccaaagcattggctgaacacggtatcgtttttggcgagcct
aagactgatattgataaagtccgtgtctggaaagagaaagttatcaatcagttaaccggt
ggtttggcaggtatggctaaaggccgtaaagtcaaagtggttaacggtttgggtaaattt
actggcgcgaacaccttagttgttgagggtgaaaatggcccaacgaccatcactttcgat
aacgcgattattgcggccggttctcgccctatccaactgccatttattcctcatgaagac
ccacgtgtttgggactcaactgatgcactggcactgaaaacggtcccagaacgtctgctg
gtgatgggcggcggtatcattggcctggagatggggacggtttaccatgccctgggttca
aaaattgatgttgttgaaatggccgaccaagttattccggcggctgataaagacgtagtg
aaagtctttaccaaacgcattagcaagcaattcaacctgatgctggaaaccaaagtgacc
gcagtagaagccaaagaagacggcatctatgtcacgatggaaggcaaaaaagcgccagca
gaaccacagcgctatgatgcggtattggttgctatcggccgtgtccctaacggtaaattg
ttggatgcaggtcaggctggcgttgaagttgacgaacgtggttttatccatgttgataaa
caactgcgcaccaatgtgccgcacatttttgccatcggcgatatcgtcggtcagccaatg
ttggcccataaaggtgttcacgaaggccacgttgccgcggaagttatctctggcatgaag
cattacttcgatccgaaagttattccatcgattgcgtacacggagccagaagtcgcatgg
gtgggtttgaccgagaaagaagcaaaagaaaaaggcatcagctacgagacatccaccttc
ccgtgggcggcatcaggccgtgctatcgcttctgattgcgccgatggtatgaccaagctg
attttcgacaaagagactcaccgcattatcggtggtgccattgttgggactaatggcggt
gaattgttgggtgaaatcggtctggccatcgagatgggttgtgatgcggaagatatcgca
ttgaccatccatgcccacccaacgttgcacgaatctgttggtctggctgccgagatttac
gaaggtagcattaccgacttacctaacccaaaagcgaaaaagaaataa
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