Yersinia hibernica LC20: LC20_04567
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Entry
LC20_04567 CDS
T03179
Name
(GenBank) transcriptional activator NhaR
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
yel
Yersinia hibernica LC20
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yel03000
]
LC20_04567
Transcription factors [BR:
yel03000
]
Prokaryotic type
Helix-turn-helix
LysR family
LC20_04567
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AHM75820
UniProt:
A0A7U4K2Q8
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Position
complement(3985810..3986709)
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AA seq
299 aa
AA seq
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MRMSHINFNHLYYFWQVCKEGSVVGAAEALFLTPQTITGQIKALEERLGGKLFKRQGRGL
VPSELGQLVFRYADKMFMLSHEMLDIVNYRKESNLLFDVGVADALSKRLISQVLETAVVD
HEKIHLRCFESTHEMLLEQLSQHKLDMILSDCPVDSSQQEGLFSVKLGECSVSFYCRQPI
PDLPFPACLQQKRLLIPGRRSMLGRKLLNWVNSKRLQVEILGEFDDAALMKAFAIYNNAI
FVAPTLYAANTYAKDDDIVEIGRLDNVQEEYYVIFAERMIQHPAVQRVCNKDFSALFSG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatgtcacatatcaatttcaatcatctttattatttctggcaggtctgcaaagaa
ggctctgtggtgggggccgctgaagctttatttttgacgccacaaactattaccgggcaa
attaaagcattagaagaacgtctgggggggaagttatttaagcgccaagggcgtgggctg
gtgccatcagaattagggcaattggtttttcgctatgccgataagatgttcatgctcagc
catgaaatgctggatattgttaactatcgcaaagaatctaacttgctatttgatgtcggt
gttgctgatgcattatccaagcgattaattagtcaggtactggaaactgccgtggtggat
catgaaaaaatccatttacgctgttttgaatccacccatgaaatgttgctagagcagttg
agccagcataagttggatatgattttgtctgattgcccggttgattccagccagcaagag
gggttgttctcagtaaaactgggcgaatgcagtgtcagcttttattgtcgccaacctatc
ccggacttgccttttcctgcctgtctgcaacaaaagcgtttgttgatcccagggcgtcgt
tcaatgctggggcgcaaattattaaattgggtcaatagcaaaaggttgcaggtagaaatt
ctcggtgagtttgatgatgcggcgctgatgaaagcttttgctatttataacaatgccatt
tttgttgcaccgacactgtatgctgccaatacttacgctaaagatgatgacattgtagaa
attggtcgtttagataatgtgcaggaagagtattacgttatttttgccgagcgcatgatt
caacatccagcggtacagcgagtgtgtaacaaagatttctccgcactttttagtggctaa
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