Yersinia hibernica LC20: LC20_04599
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Entry
LC20_04599 CDS
T03179
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
yel
Yersinia hibernica LC20
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yel03400
]
LC20_04599
DNA repair and recombination proteins [BR:
yel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LC20_04599
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
GvpD_P-loop
RecA
AAA_22
SLFN-g3_helicase
AAA_14
AAA_16
Rad51
ABC_tran
NTPase_1
nSTAND3
AAA
DUF7125
AAA_24
AAA_5
cobW
Zeta_toxin
AAA_29
DZR
Viral_helicase1
Herpes_Helicase
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
AHM75852
UniProt:
A0A7U4K2T7
LinkDB
All DBs
Position
complement(4023824..4025206)
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AA seq
460 aa
AA seq
DB search
MAKAPKRAFVCNECGADYPRWQGQCSACNAWNTITEMRLAAATSSARNERFGGYAGDAGV
SRVQKLSDISLAELPRFSTGFLEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLS
ENMKTLYVTGEESLQQVAMRAHRLGLPTAGLNMLSETSIEQICLIAEQEQPRLMVIDSIQ
VMHMADIQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS
VMLDGDGDSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSV
MVVWEGTRPLLVEIQALVDHSMMSNPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV
NVVGGVKVSETSADLALLMSLVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERIAEAA
KHGFKRAIVPYANMPKKPLPNMQVFGVKKLADALAVLEDL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtggctaaagcaccaaaacgggcattcgtttgtaatgaatgtggcgctgattacccgcgt
tggcaggggcagtgcagcgcctgtaacgcatggaataccattactgaaatgcggctggca
gcagcaacatcctcggcccgtaatgagcgttttggcggctatgccggtgatgctggcgtg
agtcgggtacagaaattatccgacatcagtctggcagaattaccgcgtttctccaccggt
tttctggagtttgaccgggtgctgggcggcggagtggtgccgggcagcgccatactgatt
ggtgggaatcccggggcggggaaaagtaccctattgctgcaaacgctctgcaaactttcc
gaaaacatgaaaaccctgtatgtcaccggcgaagagtcattgcagcaggtggcgatgcgc
gcgcatcgtctggggttacccactgctggcctgaacatgctgtctgagaccagtattgag
caaatttgcctgattgccgaacaagaacagccccggctaatggtgattgactcaatccaa
gtgatgcacatggcggatatccaatcgtcgccgggcagtgtggcgcaagtgcgagaaacc
gcggcttatcttacccgctttgccaaaacccgtggtgtcgccatcgtgatggtgggccat
gtgaccaaagatggctcgctggcggggccgaaagtcttggagcactgtattgactgctcg
gtgatgctcgacggtgatggtgactcacggtttcgcaccttacgtagccacaaaaaccgc
tttggtgccgtcaatgaattgggcgtattcgccatgaccgagcaaggtctgcgcgaagtc
agtaatccgtcggcgattttcctcagccgtggtgatgaagtgacatccggcagttcggtg
atggtggtgtgggaggggactcgcccgttattggttgaaattcaggcgcttgtagaccac
tcgatgatgtcgaacccgcgccgggtggccgtcgggctagagcaaaatcggctggcaatt
ttgttggcggtattgcaccgtcatggcggcttgcagatggcggaccaagacgtatttgtc
aatgtggtgggcggggtgaaagtcagcgaaaccagtgctgacctggccttgctgatgtcg
ctggtctccagcttacgtgaccgcccgctcccccaagatttagtggtatttggtgaggtc
gggttggccggcgagattcgcccagtacccagtggtcaggagcgtattgcggaggcggcc
aagcatggttttaaacgcgccatcgtcccttatgccaatatgccgaagaaaccgctgccc
aatatgcaggtttttggggtgaaaaagctggccgatgcgctggcagtactggaagattta
taa
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