Yersinia hibernica LC20: LC20_04665
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Entry
LC20_04665 CDS
T03179
Name
(GenBank) autoinducer 2 ABC transporter ATP-binding protein LsrA
KO
K10558
AI-2 transport system ATP-binding protein
Organism
yel
Yersinia hibernica LC20
Pathway
yel02010
ABC transporters
yel02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LC20_04665
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LC20_04665
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yel02000
]
LC20_04665
Transporters [BR:
yel02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
LC20_04665
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
RsgA_GTPase
AAA_22
MukB
ABC_ATPase
AAA_30
AAA_23
AAA_27
Motif
Other DBs
NCBI-ProteinID:
AHM75918
UniProt:
A0A7U4GI80
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Position
4081021..4082586
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AA seq
521 aa
AA seq
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MPNTHIPPPALLQVRGISKQFSGVVVLKSIDFTLQPGQVHALLGGNGAGKSTLMKIIAGV
LPPDSGSIEINGQPCLNLTPAKAHQLGIYLVPQEPMLFANLSVQENILFRLPKHQADKNK
MRQLLQSLGCHLDLSVSAGSLDVADQQLVEIMRGLMRDSRILILDEPTASLTPAETHRLF
SQIKMLLSQGVGVVFISHKLPEIRQLADWVSVMRDGGIALSGATSDFSTETIIQAITPQA
KNSELSDTQKLWLELPGNRRSQARAQSNQPVIQVNDLSGEGFAHISFEVHAGEILGLAGV
VGAGRTELAETLYGLRPASGGSVMLEDINITSMKTVNRLATGLVYLPEDRQASGLYLDAP
LSWNVCSLTQGHQGIWTHPAQEAAILERYRRALNIKFSHLEQPVRTLSGGNQQKLLIAKC
LEANPLLLIIDEPTRGVDVAARSDIYQLIRSIADQHVAIIFISSDLEEVVQMADRVLVMH
QGEISGALEGSAMNVDTIMHLAFGEHHTDTHQPAENEGASC
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgccgaatacccatattcccccaccagcgctgctccaggttcgtggtattagcaaacaa
ttttccggcgtagtggtattgaaaagtatcgactttactctgcaaccgggccaggtccac
gcgctgttaggggggaatggagcgggtaaatcaaccttgatgaaaatcatcgccggggta
ctgccgccagacagcggctcgattgaaatcaatgggcaaccttgcctaaatctcaccccg
gccaaggcccaccagcttgggatttatctggtgccgcaagagccgatgctgtttgccaat
ctgtccgtgcaggaaaatattctgttccggctgcccaagcatcaggctgacaaaaacaaa
atgcgccaattgctacaaagtttgggctgccatttagatttatccgtcagcgccggttcg
ctcgatgttgctgaccaacaattagtcgaaatcatgcgcggcctgatgcgtgactcccgg
attttaatccttgatgaacccaccgcctcactaacaccggcggaaacccatcgcttattt
agccaaataaaaatgttattgagccaaggggtcggggtggtgtttatctcccacaaattg
ccggaaattcgtcaactggccgattgggtcagtgtgatgcgcgatggcggtattgcgctg
agcggggccactagcgatttttccaccgagaccataattcaggcaattaccccgcaagct
aaaaatagcgaattatctgatacccaaaagttatggctagagttgcccggtaaccgccgc
tcccaagcacgggcgcaatccaatcagccggtgatacaagtgaatgacctgagcggcgaa
ggttttgcccatatctcctttgaagttcacgccggtgaaattctggggttagccggggtg
gtgggggctgggcgcactgaattggctgaaaccctctatggtttacggccggccagcggc
ggcagcgtcatgctggaggatatcaacatcaccagcatgaaaaccgtcaaccgcctggca
accggcctggtttacctgccggaagaccgccaagcctccgggctgtatctggatgcccct
ttgagctggaatgtctgttcattgacacaaggtcatcaaggaatttggactcatcccgcc
caagaagccgccattttggagcgctatcgtcgcgcgttgaatatcaaatttagccacctt
gagcagcccgttcgtactttatccgggggaaatcagcaaaaactgctgattgccaaatgt
ctggaagcaaatccgctgctactcattattgatgagccgactcgtggggtggatgtggca
gcccgcagtgatatttatcaattgatccgcagcattgcagatcaacatgtggcgatcatt
tttatctcgtctgatctggaagaagtggtgcaaatggcggatcgcgtgttggtgatgcac
cagggggaaatcagtggcgcactggagggcagcgccatgaatgtcgacaccattatgcat
ttggctttcggtgaacatcataccgacacccatcagcctgctgaaaatgagggcgcatca
tgttga
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