Yersinia hibernica LC20: LC20_04667
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Entry
LC20_04667 CDS
T03179
Name
(GenBank) autoinducer 2 ABC transporter permease LsrD
KO
K10557
AI-2 transport system permease protein
Organism
yel
Yersinia hibernica LC20
Pathway
yel02010
ABC transporters
yel02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LC20_04667
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LC20_04667
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yel02000
]
LC20_04667
Transporters [BR:
yel02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
LC20_04667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
PspB
Motif
Other DBs
NCBI-ProteinID:
AHM75920
UniProt:
A0A7U4GI53
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All DBs
Position
4083620..4084627
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AA seq
335 aa
AA seq
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MSLYTNFYRRYGWELALAALLVLEILLFGLSNSRMLDINVLLFSTSDFICIGIVALPLTM
VIVSGGIDISFGSTIGLCSIFLGVMFQAGVPMSIAIPLTFLVGALCGLINAGLILYTGVN
PLVITLGTMYLFGGSALLLSGISGATGYEGIGGFPAAFTDFANQTLFGLPIPLVVFMVCV
LLFWLLMHRTHSGRNVFLIGQNSRVARYSALPVARTLCLLYALTGVASAIAAVLLVSYFG
SARSDLGASFLMPAITAVVLGGANIYGGSGSILGTALAVLLVGYLQQGLQMIGTPNQISS
ALSGALLILVVVGRSISLHRHLIYEWLQRRKNTVV
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgtacacaaacttttatcggcgttatggatgggaactggccctggctgcactg
ttggtgctggagatcctgctgtttggcttatcaaattcgcgcatgctggatatcaatgtg
ctgctgttcagtaccagtgattttatctgcatcgggatagtcgccctgccactcactatg
gtgattgtcagtggtggcatcgacatctcatttggttccaccattggattgtgttcaata
ttccttggcgtgatgtttcaggcgggcgttcccatgagtatcgccatcccgctgacattt
ttggtgggcgcactctgcggtttgattaatgccgggctgattctttacaccggcgtcaac
ccactggtgatcaccctcggcaccatgtacctgtttggcggcagcgccctgctattgtcc
gggatctctggggccacgggttatgaaggcattggcggcttcccagcagcctttactgat
ttcgccaaccaaactctcttcggcctgccgatcccattggtggtctttatggtttgcgtg
ttgctgttctggttactgatgcaccgcacccacagtggccgtaacgtttttcttatcggg
caaaacagccgggtagcacgctacagcgccctgcccgtcgcacgcaccttgtgcctcttg
tatgccttgaccggtgtggcctccgccattgccgccgtcttgttggtgtcttactttggc
tcggcacgatctgacttaggggcatcattcctgatgcctgctatcaccgctgtcgtattg
ggaggcgccaatatttatggcggctccggctcaattctgggcacagcactggccgtctta
ctggtgggttacttgcaacaaggcctgcaaatgattggtacccccaatcaaatatccagc
gcgctgtccggtgcattactgattctggtcgttgtcgggcgctctatcagcttgcaccgg
catttgatttatgaatggctgcaacgtcgcaaaaatactgttgtttaa
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