Yersinia hibernica LC20: LC20_04736
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Entry
LC20_04736 CDS
T03179
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
yel
Yersinia hibernica LC20
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yel03016
]
LC20_04736
Enzymes [BR:
yel01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LC20_04736
Transfer RNA biogenesis [BR:
yel03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LC20_04736
Prokaryotic type
LC20_04736
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
CATSPERG_beta-prop
Motif
Other DBs
NCBI-ProteinID:
AHM75989
UniProt:
A0A7U4K2X6
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All DBs
Position
complement(4156984..4157928)
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AA seq
314 aa
AA seq
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MGRPRRRGRDINGILLLDKPLGLSSNDVLQKVKRLFSANRAGHTGALDPLATGMLPICLG
EATKFSQFLLDSDKRYRVVARLGQRTDTSDAEGALISEREVNVTQAQMDAALDRFRGDSQ
QVPSMYSALKHQGKPLYEYARQGIEVEREARSITVYELLFIRWEGNDLELEIHCSKGTYI
RTIIDDLGELLGCGAHVSYLRRLQVATYPSERMVTLEQLAAIVETAQMEERSPNAELDSL
LLPMDSAVLNFPEVNLLPAVAAYVKQGQPVHVAGAPSEGMVRMTEGEERNFIGIGTIAED
GRVAPKRLVVEYAE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgtccacgtcgtcgtggccgtgatattaacggcattctgttattggataagccg
ctgggcctctcctctaatgatgttttgcagaaagtaaaacggctctttagtgctaaccgc
gcgggccataccggtgcgctggatcctttagcgacgggtatgttgccaatctgtttaggg
gaagcgactaagttttcccaatttttgctcgattccgataaacgttatcgggtggtggct
cgcttaggccagcgcactgatacctcggatgccgagggggcgttaattagtgagcgggaa
gtcaacgtcactcaggctcagatggatgctgcgctagaccgtttccgtggtgacagccag
caagtgccgtcgatgtattctgcactgaagcaccaaggcaagccgctgtacgaatatgcc
cgtcaggggattgaagtcgagcgtgaagctcgcagtattaccgtttacgaactgctgttt
atccgctgggaaggcaatgatctcgagctggaaatccattgttctaaaggaacttacatt
cgcaccattattgatgatttgggcgaattgttgggttgcggtgctcatgtgagttatctg
cgccgattacaagtggcgacttatcccagtgagcgcatggtgaccttagagcagttggct
gcgatagttgaaacggcacaaatggaagagcgctcaccaaatgccgaactggattcgctg
ttattgccgatggatagcgcagtgttaaacttccctgaagtcaatctgttacctgcggtt
gctgcctatgtaaaacaagggcaaccggtgcatgtcgcgggtgcgccaagtgaaggaatg
gtgcgcatgactgaaggtgaagagcgtaatttcattggcattggcacgattgcagaagat
ggtcgtgtggcgccgaaacgtttagtcgtggaatacgcggagtaa
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