Yersinia hibernica LC20: LC20_04739
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Entry
LC20_04739 CDS
T03179
Symbol
nusA
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
yel
Yersinia hibernica LC20
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yel03021
]
LC20_04739 (nusA)
03009 Ribosome biogenesis [BR:
yel03009
]
LC20_04739 (nusA)
Transcription machinery [BR:
yel03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
LC20_04739 (nusA)
Ribosome biogenesis [BR:
yel03009
]
Prokaryotic type
rRNA transcription factors
LC20_04739 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_NusA_C
S1
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
AHM75992
UniProt:
A0A7U4GIB9
LinkDB
All DBs
Position
complement(4161106..4162593)
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AA seq
495 aa
AA seq
DB search
MNKEILAVVEAVSNEKSLPREKIFEALETALATATKKKYEQEIEVRVSIDRKTGDFDTFR
RWVAVDEVTMPTREITLEAAQFEDPSLQLGDYVEDQIESVTFDRITTQTAKQVIVQKVRE
AERAMVVEQFRQYLGEIVTGTVKKVNRDSIALDLGNNAEAVIGREDMLPRENFRPGDRIR
GVLYDVRPEARGAQLFVSRSRPEMLVELFRIEVPEIGEELIEIKAAARDPGSRAKIAVKT
NDKRIDPVGACVGMRGARVQAVSSELGGERIDIVLWDDNPAQFVINAMAPADVASIVVDE
DKHTMDVAVEASNLAQAIGRNGQNVRLAAQLSGWELNVMTADDLQAKHQAEAHAAIDTFT
KYLDIDEDFATVLVEEGFSSLEELAYVPMKELLEIDGLDEDTVEALRDRAKAALTTLALA
QEESLGDQKPADDLLSLAGLERSMAFKLAARGVCTLEDLAEQGIDDLADIEGLSDEQAGE
LIMAARNICWFGDNA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagagattctggctgttgtagaagcagtttccaatgagaaatcccttccgcgc
gagaagatttttgaggcgttggaaaccgctctagcgacagcgaccaagaaaaaatacgaa
caagaaattgaagttcgcgtcagtatcgaccgtaaaaccggcgatttcgacaccttccgt
cgttgggtggcggttgacgaagtcacgatgccaacgcgtgaaatcacattagaagcagct
cagtttgaagacccttcgctccagttgggcgattatgttgaagatcaaattgaatctgtc
acttttgaccgcattaccactcaaaccgccaagcaagttatcgtacaaaaagtacgtgaa
gctgaacgtgctatggtggttgaacagttccgccaatacttgggcgaaattgtgactggt
accgtgaaaaaagttaaccgcgacagtattgcactggatctgggcaataatgcagaagcg
gttattggtcgtgaagatatgttgccgcgcgaaaacttccgcccaggtgaccgtatccgt
ggtgttctgtacgatgttcgtccagaagctcgtggtgctcaactgtttgttagccgttca
cgccctgaaatgctggttgaactgttccgcattgaagtgccagaaatcggcgaagaattg
atcgaaattaaagccgcagcccgtgatcctggctcgcgtgctaaaattgcggtcaaaacc
aacgacaaacgtatcgaccccgttggtgcctgtgttggtatgcgtggtgcccgtgttcaa
gctgtttccagcgaacttggcggcgagcgcattgatattgtattgtgggatgataatcca
gcccagtttgtgattaatgccatggcgccagctgatgttgcgtcaattgtggttgatgaa
gacaaacacacgatggatgttgccgttgaagccagtaacctggcacaggcaattggccgt
aatggtcagaatgtgcgtttagcggcacagctgagtggctgggaactgaacgtaatgacg
gcggacgatcttcaggcgaagcatcaggccgaggctcatgccgctattgatactttcacc
aaatatcttgatatcgatgaggactttgccaccgtcttggtagaggaaggtttctcttct
ctggaagaattggcttacgtgccaatgaaagaacttctggaaatcgatggtcttgacgaa
gatacggttgaagcgctgcgtgaccgcgccaaagctgcattgaccacgctggccctggca
caagaagaaagtcttggcgaccaaaaacccgctgacgatctgctgagtctggccggtctg
gaacgtagcatggcatttaaattggctgcgcgcggtgtgtgtacgctggaagatcttgcc
gagcagggtatcgatgatctggcggatattgaagggcttagcgatgagcaagccggcgag
ctgattatggccgcacgtaatatctgttggtttggcgataacgcgtaa
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