Yersinia hibernica LC20: LC20_04813
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Entry
LC20_04813 CDS
T03179
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
yel
Yersinia hibernica LC20
Pathway
yel03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LC20_04813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yel03019
]
LC20_04813
03009 Ribosome biogenesis [BR:
yel03009
]
LC20_04813
Messenger RNA biogenesis [BR:
yel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LC20_04813
Ribosome biogenesis [BR:
yel03009
]
Eukaryotic type
Pre-60S particles
RNases
LC20_04813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AHM76065
UniProt:
A0A7U4GIE9
LinkDB
All DBs
Position
complement(4227958..4228503)
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AA seq
181 aa
AA seq
DB search
MAENQNNLIWIDLEMTGLDPLRDRIIEIATLVTDANLNILAEGPVLAIHQFDEQLGLMDE
WNVRTHTGSGLVERVKTSPFSEHDAELQTIEFLKQWVPAGTSPICGNSVGQDRRFLFRYM
PELEAYFHYRYLDVSTLKELARRWKPEILPGFKKQNTHQALDDIRESVAELAYYREHFIQ
S
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaatcaaaacaatctgatctggatcgatctggaaatgaccggccttgatccg
ctgcgggatcggatcatcgaaatagccactctggtcaccgatgccaacctcaatattttg
gcagaaggcccggtgctcgccatccatcagtttgatgaacagcttgggctaatggatgaa
tggaacgtgcgaactcatactggtagtgggttagtggaacgggtaaaaaccagccctttt
agtgagcacgatgctgaattacaaaccattgaatttctaaagcagtgggttccggccggc
acttccccgatttgcggtaacagtgtgggccaagaccggcgttttctgttccgttatatg
ccagaactggaagcctacttccattaccgttatctcgatgtgagtactttgaaagaactg
gctcgccgctggaaacctgaaattttgcctggttttaagaagcagaatactcaccaagcc
ctggatgatattcgcgagtcggtcgcggaactggcctactatcgcgaacattttattcag
tcttaa
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