Yersinia hibernica LC20: LC20_04819
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Entry
LC20_04819 CDS
T03179
Name
(GenBank) fumarate reductase (quinol) flavoprotein subunit
KO
K00244
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
yel
Yersinia hibernica LC20
Pathway
yel00020
Citrate cycle (TCA cycle)
yel00190
Oxidative phosphorylation
yel00620
Pyruvate metabolism
yel00650
Butanoate metabolism
yel00720
Other carbon fixation pathways
yel01100
Metabolic pathways
yel01110
Biosynthesis of secondary metabolites
yel01120
Microbial metabolism in diverse environments
yel01200
Carbon metabolism
yel02020
Two-component system
Module
yel_M00009
Citrate cycle (TCA cycle, Krebs cycle)
yel_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
yel_M00150
Fumarate reductase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LC20_04819
00620 Pyruvate metabolism
LC20_04819
00650 Butanoate metabolism
LC20_04819
09102 Energy metabolism
00190 Oxidative phosphorylation
LC20_04819
00720 Other carbon fixation pathways
LC20_04819
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LC20_04819
Enzymes [BR:
yel01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LC20_04819
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
HI0933_like
Thi4
GIDA
DAO
Lycopene_cycl
FAD_oxidored
FabD_helical_ins
Motif
Other DBs
NCBI-ProteinID:
AHM76071
LinkDB
All DBs
Position
4235677..4237491
Genome browser
AA seq
604 aa
AA seq
DB search
MQTFNADLAIIGAGGAGLRAAIAAAEANPQLKIALISKVYPMRSHTVAAEGGSAAVTQDH
DTFDYHFHDTVAGGDWLCEQDVVDHFVHHCPQEMAQLEIWGCPWSRKPDGSVNVRRFGGM
KIERTWFAADKTGFHMLHTLFQTSLKYPQIQRLDEHFVLDILVDDGQARGVVAMNMMEGT
RVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAFHHGVPLRDMEFVQYHPTGLPGS
GILMTEGCRGEGGILVNKDGYRYLQDYGMGPETPLGEPKNKYMELGPRDKVSQAFWHEWR
AGRTIATPRGDVVYLDLRHLGEKKLLERLPFICELAKAYVGVDPVKDPIPVRPTAHYTMG
GIETNQQCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRVAGEQAAARAMESKP
ANGSALDAQARDVETRLSNLMKQEGTENWSKIRDEMGLSMEEGCGIYRTPELMQKTVDKL
AELKERFKRVKITDNSSVFNTDLLYTIELGYGLDVAECMAHSALNRRESRGAHQRLDEGC
TERDDVNFLKHTLAFHTPGGAPRLEYSDVKITKLAPAKRVYGGEATAQDAKDAKDLKDKE
QAND
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaacctttaacgccgatcttgccattattggggccgggggcgctggtttacgtgca
gcaatagccgcagcggaagccaaccctcagctgaagattgctctgatctcgaaagtatac
ccaatgcgcagccatactgtggccgcagaagggggatcagctgctgtcacacaggaccac
gatacctttgactatcattttcacgacaccgttgccggtggtgactggttatgcgaacaa
gatgttgtagaccattttgttcaccactgcccacaagaaatggcgcagttagaaatttgg
ggctgcccatggagtcgtaaaccagacggttcagttaacgttcgccgcttcggcggaatg
aaaattgagcgcacgtggtttgccgcggataaaaccggcttccacatgctgcatactctg
ttccaaacctcgttaaaatacccgcaaattcaacgccttgatgaacacttcgtgctggat
attctagtcgatgatgggcaggctcgcggtgttgttgccatgaatatgatggaaggcacc
cgggtacaaatccgcgcgaatgccgtggtcatggcgaccgggggggcaggccgagtttat
cgttataacaccaacggcggtattgttaccggtgatggtatggggatggcattccaccac
ggcgttccgctgcgggatatggaatttgtgcaatatcaccctactggcttgccaggttca
ggcatcctgatgaccgaaggctgtcgtggtgaaggcggtattctggtcaataaagatggc
tatcgctatttgcaggattacggcatggggcctgaaaccccgctcggagagccgaagaac
aaatacatggaattgggcccgcgcgataaagtctcgcaagctttctggcatgaatggcgg
gctgggcgcactatcgccacaccgcgtggtgatgtggtctatctggacttgcgccacttg
ggcgagaaaaaactgcttgagcgcctaccctttatctgtgaactggcaaaagcttatgtg
ggggttgacccggttaaagaccccatcccggtgcgcccaaccgcgcattacactatgggc
ggcatcgaaactaaccagcaatgtgaaactcgcatcaaagggctatttgcagtcggcgaa
tgttcttctgttggcctgcacggcgcgaaccgcttggggtccaactcactggccgaactg
gtggtctttggtcgggtggctggcgagcaagctgctgcacgcgccatggaaagcaaaccg
gccaacggcagcgcattagatgcgcaagcacgtgatgtggaaacccgcctgagcaatctg
atgaaacaggaagggactgagaattggtctaaaattcgtgatgaaatgggcctgtcaatg
gaagagggttgtggcatttaccgcaccccggaactgatgcagaaaacggtggataaactg
gctgagctgaaagagcgcttcaaacgcgtgaaaatcaccgacaattccagtgtattcaat
accgacctgctctacaccatcgaactgggttatggcctggatgtcgccgaatgtatggcc
cactcagcactgaatcgcagagaatctcgcggcgcgcaccaacgtttggatgaaggctgc
accgagcgtgatgatgttaacttcctcaagcacactctcgctttccatactccgggtggc
gcaccacgtcttgagtacagcgacgtaaaaattaccaagttggcaccagcaaaacgtgtt
tatggtggtgaagccacagcacaagatgctaaagatgccaaagatttaaaggataaggag
caggcgaatgactga
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