Yersinia hibernica LC20: LC20_04829
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Entry
LC20_04829 CDS
T03179
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
yel
Yersinia hibernica LC20
Pathway
yel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LC20_04829 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yel03019
]
LC20_04829 (groL)
03110 Chaperones and folding catalysts [BR:
yel03110
]
LC20_04829 (groL)
03029 Mitochondrial biogenesis [BR:
yel03029
]
LC20_04829 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
yel04147
]
LC20_04829 (groL)
Enzymes [BR:
yel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LC20_04829 (groL)
Messenger RNA biogenesis [BR:
yel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LC20_04829 (groL)
Chaperones and folding catalysts [BR:
yel03110
]
Heat shock proteins
HSP60 / Chaperonin
LC20_04829 (groL)
Mitochondrial biogenesis [BR:
yel03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LC20_04829 (groL)
Exosome [BR:
yel04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LC20_04829 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LC20_04829 (groL)
Exosomal proteins of breast cancer cells
LC20_04829 (groL)
Exosomal proteins of colorectal cancer cells
LC20_04829 (groL)
Exosomal proteins of bladder cancer cells
LC20_04829 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF2712
Motif
Other DBs
NCBI-ProteinID:
AHM76081
UniProt:
A0A7U4GIG5
LinkDB
All DBs
Position
complement(4242760..4244412)
Genome browser
AA seq
550 aa
AA seq
DB search
MAAKDVKFGNDARIKMLRGVNILADAVKVTLGPKGRNVVLDKSFGSPTITKDGVSVAREV
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGI
DKAVIAAVEELKKLSVPCSDSKAIAQVGTISANSDSTVGELIAQAMEKVGKEGVITVEEG
SGLQDELDVVEGMQFDRGYLSPYFINKPETGSIELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV
ISEEIGLELEKTTLEDLGQAKRVVINKDTTIIIDGVGDEAGIQGRVAQIRQQIEDATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RAAAAITAAGLKGDNEDQNVGIKVALRAMESPLRQIVVNAGEEASVIANNVKAGSGSYGY
NAYSEEYGDMIAMGILDPTKVTRSALQYAASIAGLMITTECMITDLPRDDKGADMGAGGM
GGMGGMGGMM
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggtaacgacgcccgcatcaaaatgctacgcggcgta
aacattcttgctgatgcagtaaaagtgaccctgggcccgaaaggccgtaacgtagttctg
gacaagtcttttggctctccaactatcaccaaagatggtgtgtctgttgcgcgtgaggta
gaactggaagacaagtttgagaacatgggtgcacagatggttaaagaagttgcctctaaa
gcgaatgacgcggcaggtgacggcactaccactgcaactgtattggctcaatccattatc
actgaaggcctgaaagcagttgcggccggcatgaacccaatggacctgaaacgcggtatc
gacaaagctgttatcgctgcggttgaagagctgaaaaaactgtctgtaccttgctctgat
tctaaagcgattgctcaggtaggtaccatctctgcaaactcagactcaactgtgggtgag
ctgattgcacaagcgatggaaaaagtcggtaaagagggcgttatcaccgttgaagaaggt
tcaggcctgcaagacgagctggacgtggtagaaggtatgcagttcgaccgtggctacctg
tctccttacttcatcaataaaccagaaactggttctattgaacttgaaagcccattcatc
ctgttagctgataagaaaatctctaacatccgtgaaatgctgccagtgctggaagccgtc
gcgaaagccggtaaaccactgctgatcatcgcagaggatgttgaaggtgaagctctggca
actctggtggtgaacaccatgcgcggtattgttaaagttgccgctgttaaagcacctggt
ttcggtgatcgtcgtaaagctatgctgcaagacatcgctaccctgactggcggtacggtt
atctctgaagagatcggcctggagctggaaaaaaccaccctggaagatctgggtcaggcg
aaacgtgttgttatcaacaaagacaccactatcatcattgatggcgtaggcgacgaagct
gggattcagggccgtgttgctcagatccgtcagcaaattgaagatgcgacttctgactac
gacaaagaaaaactgcaagagcgtgtggctaaactggctggcggcgttgccgttatcaaa
gttggcgctgcaactgaagttgaaatgaaagagaaaaaagcgcgcgttgaagatgctctg
cacgcaactcgtgctgcggtagaagaaggcgtagttgcgggtggtggtgttgctctgatt
cgtgctgcagctgctatcactgcggctggtctgaaaggcgacaacgaagaccagaacgtg
ggtatcaaagttgctctgcgcgcgatggaatctccactgcgccagatcgtagttaacgcc
ggtgaagaagcatctgttatcgcgaacaacgttaaagcgggttcaggtagctacggctac
aacgcgtacagcgaagaatacggcgacatgatcgcgatgggtatcttggacccaactaaa
gtgactcgttctgctctgcagtacgcagcctctattgctggtctgatgatcaccaccgag
tgcatgataactgacctgccacgtgatgataaaggtgctgatatgggcgctggcggcatg
ggtggtatgggcggcatgggcggcatgatgtaa
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