Yersinia hibernica LC20: LC20_04844
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Entry
LC20_04844 CDS
T03179
Name
(GenBank) CdaR family transcriptional regulator
KO
K02647
carbohydrate diacid regulator
Organism
yel
Yersinia hibernica LC20
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yel03000
]
LC20_04844
Transcription factors [BR:
yel03000
]
Prokaryotic type
Helix-turn-helix
Other families
LC20_04844
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
GAF
GAF_2
Motif
Other DBs
NCBI-ProteinID:
AHM76096
UniProt:
A0A7U4K2L3
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Position
complement(4256098..4257255)
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AA seq
385 aa
AA seq
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MSVYNLDPRLAQDIVTRTMKIIDTNINVMDGKGRIIGSGDEERLGELHEGALLALSHGRI
VDIDDAVARQLHGVKPGINLPLRLEGEIVGVIGLTGNPGQLRQYGELVCMAAEMMMEQAR
LVHLLAQDSRLREELVLNLIRTEEISPALIEWAQRLGVDINEPRVVAVVDVDSGQLSVDS
AMSELQELQTLLTTPERNNLIAIVSLTEMVVLKPALNSHGRWDAVDHRRRMESLLSRMTE
RGRLRVRLSLGNFFTGPGSIARSYRTARTTMAVGKQRMPEQRSYYYQDLVLPVLLDSLRG
GWQANELALPLAKLRAMDSNGLLRRTLACWFRHNVQPTATAKALFIHRNTLEYRLNRISE
LTGLDLANFDDRLLLYVALQLGEQE
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtatataaccttgatccccggcttgcccaagatatcgtcacccggacgatgaag
atcattgataccaatattaacgtgatggatggcaaggggaggatcattggcagcggtgat
gaagagcggcttggcgagctgcatgagggggcgctgctggcgttatcccatggccgtatt
gtcgacattgatgatgcggttgcccgccaattacacggcgtgaagcccggtatcaatctg
ccattgcgccttgagggggaaattgtcggcgtgattggcctgaccgggaatcccggacaa
ttgcgccaatatggcgagctggtatgcatggccgccgaaatgatgatggaacaggcgcgg
ctggtgcacctgctggcgcaggatagccgtttgcgtgaagagctggtgctgaacttgatc
cgcactgaagaaatatcaccggcactgattgaatgggcgcaacgtctcggggtcgatatc
aatgaaccgcgcgtggtggcggtggtggatgtggacagcggccaactgagtgttgacagt
gccatgtcggaattacaagagttgcaaaccctgctgactaccccggagcgcaataatctg
attgcgattgtctccctcaccgaaatggtggtgctgaaaccggcacttaacagccatggc
cgctgggatgcggtggatcaccgacgccggatggaatcattactttcacgtatgacggaa
cgtggccgcttgcgggtgcggctctcattagggaatttctttacaggccccggcagtatt
gcccgctcataccgcaccgcccgcaccaccatggcggtcggcaaacaacggatgccagaa
cagcgcagttactattaccaagatttggttttgcccgtcttgctcgacagcttgcgcggt
ggttggcaagccaatgagttggctctgccattagctaaattgcgggccatggacagtaat
ggcttactgcgccgcacattggcttgttggtttcgccataatgtgcaacccacggcgacg
gcgaaagcgctgtttatccaccgtaatacattggaatatcgacttaatcgtatttcggaa
ttgaccgggctggatttagcgaatttcgatgaccgcttgttgttgtatgtcgctttacaa
ttaggcgaacaggaatag
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