Yersinia hibernica LC20: LC20_04964
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Entry
LC20_04964 CDS
T03179
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
yel
Yersinia hibernica LC20
Pathway
yel00071
Fatty acid degradation
yel00280
Valine, leucine and isoleucine degradation
yel00310
Lysine degradation
yel00362
Benzoate degradation
yel00380
Tryptophan metabolism
yel00410
beta-Alanine metabolism
yel00640
Propanoate metabolism
yel00650
Butanoate metabolism
yel00907
Pinene, camphor and geraniol degradation
yel00930
Caprolactam degradation
yel01100
Metabolic pathways
yel01110
Biosynthesis of secondary metabolites
yel01120
Microbial metabolism in diverse environments
yel01200
Carbon metabolism
yel01212
Fatty acid metabolism
Module
yel_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
LC20_04964
00650 Butanoate metabolism
LC20_04964
09103 Lipid metabolism
00071 Fatty acid degradation
LC20_04964
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LC20_04964
00310 Lysine degradation
LC20_04964
00380 Tryptophan metabolism
LC20_04964
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
LC20_04964
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LC20_04964
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LC20_04964
00930 Caprolactam degradation
LC20_04964
Enzymes [BR:
yel01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
LC20_04964
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
LC20_04964
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
LC20_04964
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
LC20_04964
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AHM76215
UniProt:
A0A7U4GIL1
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All DBs
Position
4369553..4371742
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AA seq
729 aa
AA seq
DB search
MLYQSETLKLHWLENGIAELVFDAPGSVNKLDTKTVANLGEALAVLEKQSELKGLLLRSA
KAAFIVGADITEFLSLFNEPPEKLHQWLVFANDIFNRLEDLPVPTIAAINGYALGGGCEC
ILATDFRVASPEARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDIIAKDALK
VGLVDAVVAPEKLADAALVMLKQAIDEKLDWQAARRPKLEPLKLNPTEAAMCFTIAKGMV
MQVAGKHYPAPLTAVKTIEAAAKFGRAEALKLETNSFVPLAGSNEARALVGIFLNDQYVK
GQAKKLAKGVSAPKQAAVLGAGIMGGGIAYQSALKGVPVMMKDINDKSLTLGMNEAAKLL
NKQLERGKIDGLKMANILATIQPTLDYTGIERAQVIVEAVVENPKVKAAVLAEVEALIGE
ETVLASNTSTIPIDQLANALKRPENFCGMHFFNPVHRMPLVEIIRGAKTSDKTIAAVVAY
ATQMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLVRDGADFRQIDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAVGFPDRMSKDYRDAVDVMFDNQRFGQKNGQGFYRYTQDAKGKP
RKEHDEQVDVLLAQVSQPIQKFSDDDIIARTMIPMINEVVRCLEEGIIASPAEGDMALVY
GLGFPPFHGGVFRYLDTIGSANYVEMAQRYAHLGALYHIPAGLRAKAEHNESYYPVAAAL
LDVTTSQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaagcgaaacactaaagcttcactggttggaaaacggtattgccgagttg
gtgtttgatgcaccgggttcagttaataagctggataccaaaactgtagccaatctgggt
gaagccctagctgtgttggaaaaacaaagcgaactcaaagggttgctattgcgctccgcc
aaagcagcctttattgtcggtgccgatatcaccgagtttctgtccctgtttaacgagcca
ccagaaaaactgcaccaatggctggttttcgctaatgatatcttcaatcgtctagaagat
ttaccggtgccaaccattgcggcaatcaatggctatgcgctgggtggcggatgtgaatgt
attctggcgaccgattttcgcgtggcctcccccgaagcccgtatcggcctaccggaaacc
aagctcggtatcatgccgggctttggcggctcggtgcggttaccgcgcttattaggtgct
gacagtgcgctggaaattatcgccgcgggtaaagatattattgccaaagatgccttaaaa
gtggggttggttgatgccgttgtggcccctgaaaagctggccgatgctgctttagtcatg
ctgaagcaagccattgacgagaaactcgactggcaagcagcacgccgcccgaaattagag
ccactgaagctcaacccgaccgaagccgccatgtgctttacaattgccaaaggcatggtc
atgcaagtggccggtaaacactatccggctccgctgactgccgtcaaaaccattgaagcc
gcggcaaaatttggccgagccgaagcattgaagctggaaaccaatagttttgttccctta
gccggctccaatgaagcacgagcattagtcggcattttcctcaatgatcaatatgttaaa
ggtcaagctaagaagctcgccaaaggtgtcagtgcgccaaaacaggccgcggtactgggc
gctgggattatgggcggcggtatcgcctatcaatcggcactgaaaggtgtgccggtcatg
atgaaagatatcaatgacaaatctctgacattggggatgaatgaagccgctaagctactg
aataaacagttggaacgcggcaaaatagatggtctgaaaatggcgaatatcctggcgacc
atccagccgacattagattacaccggcattgagcgcgcccaagtcatcgtggaagccgtg
gtggaaaatccaaaagtgaaagcggccgtcctggccgaggttgaagcactgattggcgag
gaaacggtgttagcctcgaatacctcgacaatcccaattgatcagctcgctaacgccctc
aaacgcccagaaaatttctgtgggatgcacttcttcaacccggttcaccggatgccgctg
gttgagattattcgtggcgcgaaaacctcagataaaactatcgccgccgttgtagcatac
gccacacaaatgggtaaaacccccattgtggtgaatgattgcccgggcttctttgttaac
cgtgtcttattcccgtatctggctggattcggcatgttggtcagagacggcgcggacttc
cgccagattgataaagtgatggagaagcaatttggctggccaatgggccctgcttatcta
ttagatgtggtcggcattgataccgcgcaccatgcacaagccgtgatggctgttggtttc
cctgaccgcatgagtaaagattatcgcgatgccgttgacgtgatgtttgataatcaacga
tttggccaaaagaatggccaaggcttctaccgctacacccaggatgccaagggcaaaccg
cgtaaagagcatgacgaacaagtcgacgtgttactggcgcaagtcagtcaacccattcag
aagtttagcgatgatgacattattgcccgcaccatgatcccgatgatcaatgaagtggtg
cgctgcctggaagagggcattatcgccagcccagcggagggcgatatggcgctagtttat
ggccttggcttcccaccattccacggcggtgttttccgttaccttgacaccatcggcagt
gcaaattatgtcgaaatggcccagcgctatgcccatcttggtgcgctctatcacatccca
gccgggctgagagccaaagctgaacataacgaaagctattatcctgtggcagcagcgctg
cttgatgttactaccagtcaaccggcatga
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