Yersinia hibernica LC20: LC20_04970
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Entry
LC20_04970 CDS
T03179
Name
(GenBank) 3'-5' ssDNA/RNA exonuclease TatD
KO
K03424
TatD DNase family protein [EC:3.1.21.-]
Organism
yel
Yersinia hibernica LC20
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
LC20_04970
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Motif
Pfam:
TatD_DNase
Motif
Other DBs
NCBI-ProteinID:
AHM76221
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Position
complement(4377202..4377984)
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AA seq
260 aa
AA seq
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MFDIGVNLTSSQFAKDCPQVVARAKEAGVTGMLITGTNAKESQAALDVAMAYPEYCWSTA
GVHPHHASSWQIEVEQQIRALVTNDAVVVIGECGLDFNRNFSTPAAQEIAFTAQLALAAE
LSLPVFLHCREAHERFITLLSPWLDKIPAAVVHCFTGTADELNSCLALGLSIGITGWVCD
ERRGLELRALLPRIPVEQLLLETDAPYLLPRDIHPKPASRRNEPCFLPHIVQQVAAWRQE
DPQWLGQKTDENARRIFRLV
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatatcggcgtgaacttaaccagttcacaatttgcaaaagattgccctcaggtc
gtagcccgtgcaaaagaagctggggttaccggtatgctgattaccggtacaaatgctaaa
gaaagccaggctgcacttgatgttgccatggcctatccagaatattgctggtcaacggcc
ggcgttcatcctcatcatgcgagcagttggcaaatagaggtagagcagcaaattagggca
ttggtaaccaatgacgctgtcgtcgtcattggcgaatgtgggttggattttaatcgcaac
ttttccactcccgcagcacaagaaatcgcctttactgcacagcttgctttggccgctgaa
ctttctttgcccgttttcttgcattgccgagaagctcacgaacgtttcatcactctgctt
tcgccttggctagataaaattcccgcggctgtggtgcactgctttaccggcactgctgat
gaattaaattcttgcttggcattaggtctgtctatcggtattaccggttgggtctgtgac
gagcgacgaggccttgaacttagggcgttattaccgcgtattcctgttgagcaattgctg
ctggaaaccgatgccccgtatttattgccgcgagatatacatcctaaacctgcatcccgc
cgcaatgaaccctgctttctgcctcatatcgtccagcaggttgctgcctggcgacaagaa
gacccgcaatggctgggacagaaaactgatgaaaacgcccgccggattttccggttggtt
taa
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