Yersinia hibernica LC20: LC20_05047
Help
Entry
LC20_05047 CDS
T03179
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
yel
Yersinia hibernica LC20
Pathway
yel03420
Nucleotide excision repair
yel03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LC20_05047
03430 Mismatch repair
LC20_05047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yel03400
]
LC20_05047
Enzymes [BR:
yel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LC20_05047
DNA repair and recombination proteins [BR:
yel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LC20_05047
MMR (mismatch excision repair)
Other MMR factors
LC20_05047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
PhoH
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AHM76298
UniProt:
A0A7U4GIT1
LinkDB
All DBs
Position
complement(4446604..4448766)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSDLLDSLNEKQREAVAAPRCNLLVLAGAGSGKTRVLVHRIAWLLSVENASPYSIIAV
TFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHMDANLPQDFQILDSDDQL
RLLKRLVKALNLDEKQWPPRQAMWYINGKKDEGLRPQHIESYGNPVEATWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNILVDEFQDTNNIQYAWIRLLAGDR
SNVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAETIRLEQNYRSTSNILTAANTLIANN
DGRMGKNLWTDGAEGEPISLYCAFNELDEARFVVNRIKAWQDSGGALNDCAILYRSNAQS
RVLEEALLQTAMPYRIYGGQRFFERQEIKDALAYLRLISNRNDDAAFERVVNTPTRGIGD
RTLDVIRHTARDRQLTLWQSTRAMLQEQVLAGRAASALQRFVELVDSLAHETADMPLHVQ
TDRVIRDSGLWAMYEQEKGEKGQARIENLEELVNATRQYSYQDEDQDLMPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGLTRAMQKLTLCYAESRRLYGKEVNHRPSRFIGELPQECVEEVRLRATVSRPVNHRSMG
TPMNENDSGFSLGQRVRHPKFGEGTIVNLEGSGEHSRLQVAFPGEGIKWLVAAYARLEAV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtctctgacctgctcgacagcctgaatgaaaaacaacgcgaagccgtggccgca
ccacgttgcaacctgttggtactggccggtgcgggcagtggtaaaactcgggtgctggtg
caccgtattgcttggctgttatcggtagaaaatgcctctccctattccattatcgccgtc
acctttaccaataaagcggcggctgaaatgcgccaccgcattgagcatttgattggcacc
agccagggcgggatgtggattggcactttccacggtctggcgcatcggttgctgcgcgct
catcacatggacgccaatctgccacaggatttccaaatccttgacagcgacgaccaactg
cgtttattgaagcggttggttaaagcattgaatttagacgagaaacaatggccgccgcgt
caagcaatgtggtatatcaacggcaaaaaagatgaagggctccgcccacagcatattgag
agctacggcaacccggtcgaagccacgtggctgcgtatctaccaagcctatcaggaggct
tgtgaccgcgcgggtttagtggattttgccgagctattattgcgcgcgcatgagttgtgg
ctgaataagccacacattctgaatcattatcgcgagcgctttaccaacattctggtggat
gagttccaggataccaataacatccaatacgcctggattcgcctgctggcaggggatcgc
tccaatgtgatgattgtcggcgacgatgaccagtcaatctatggctggcgcggggcgcag
gtggaaaatatccagcgtttcctgaaagatttccccggtgctgaaaccatccggttggaa
caaaattaccgctcgaccagcaacatcctgaccgcggcgaatactttgattgccaataat
gatggccgcatggggaaaaacctgtggactgatggcgctgagggtgaacccatctcactc
tattgcgcctttaatgaattggatgaagctcgttttgtcgtgaaccgcattaaagcttgg
caggacagcggtggcgcgctgaatgattgcgccattttgtatcgcagcaatgcccaatcg
cgcgtgctggaagaggccttattacagaccgcgatgccataccgcatatatggtggtcag
cgcttcttcgaacgccaggaaattaaagatgcattggcttatttgcgcttaatttccaat
cgcaatgatgatgcggcttttgagcgggtggttaatacgccaacgcgtggtattggcgat
cgcactttagatgttattcgccacacggcccgtgatcgccaattaaccttgtggcagtca
actcgcgctatgttgcaggagcaggtgctggcgggccgtgcggcttcggcgctgcaacgt
tttgtcgagctggtggattcactggcacatgaaaccgcagatatgccgctgcatgtgcaa
actgaccgagtgattcgtgactccggtttatgggcgatgtatgagcaggagaaaggcgaa
aaaggtcaggcacggattgagaaccttgaagaactggtgaatgcgactcgccaatatagc
tatcaggacgaagatcaggatctgatgccattacaggcatttctctcccatgcggcactg
gaggccggagaggggcaggccgatgcctatcaggatgcggtgcagctgatgacgctccat
tcagcaaaagggttggagttcccacaggtatttatcgtgggtatggaagagggcatgttc
cccagccagatgtcactggatgagggcgggcgtttggaggaagagcgccgcttggcctat
gtggggctgacccgtgctatgcagaaactcactctttgctatgcggagagccgtcgtctg
tatggcaaagaagtgaatcatcggccatcacgttttattggcgaactgccgcaggagtgt
gtcgaagaagtacggttacgtgcgacggtctctcgtccagtaaaccaccgcagcatgggc
acgccgatgaatgaaaatgacagtggcttctcactgggtcaacgagtccgtcaccctaag
tttggcgagggcactatcgtgaatctagagggcagtggtgaacacagccggttacaggtg
gctttccccggcgaggggattaagtggctggtggctgcttatgccaggttagaggcggtc
taa
DBGET
integrated database retrieval system
