Yersinia hibernica LC20: LC20_05124
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Entry
LC20_05124 CDS
T03179
Name
(GenBank) type I secretion system permease/ATPase
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
yel
Yersinia hibernica LC20
Pathway
yel02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LC20_05124
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yel02000
]
LC20_05124
02044 Secretion system [BR:
yel02044
]
LC20_05124
Transporters [BR:
yel02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
LC20_05124
Secretion system [BR:
yel02044
]
Type I secretion system
Multiple protein transporter
LC20_05124
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
AAA_22
AAA_16
AAA_29
AAA_33
DUF87
nSTAND3
Dirigent
Mg_chelatase
RsgA_GTPase
Adeno_IVa2
AAA_18
DUF3405
Motif
Other DBs
NCBI-ProteinID:
AHM76375
UniProt:
A0A7U4GIX5
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Position
complement(4536056..4537861)
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AA seq
601 aa
AA seq
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MPWNHIKTSELTPITVLSVLAGHKKILWGIGLFTAVINILMLAPAIYMLQVYDRVLVSAN
TMTLLMLTILVLGIFVFIGLLEWVRSAIVIRLGTRIDMQLNQRVFNAAFASQLRGHKAPA
AQALNDLTSLRQFATGNALFAFFDAPWFPLYLLVIFVLHPWLGVLATVGACVLIFLAWFN
QWVCKKPLKEASTITSQATQQANANLRNADAIEAMGMLDALRQRWLTQHSHFLYQQNIAS
DKSSQVTAVSKSSRQALQSMMLGLGALLVIDGAITAGVMIAGSILIGRVLSPIDQLIAVW
KQWSQARLSYQRLAHLLAEHPPVPVGMVLSAPTGKLSVTQLTVCQPGTHTPILYSINFEL
HPGHVLGVLGPSGSGKSTLAKLLVACKPAFSGSVRLDSANLSQWDKAHLGEFIGYLPQDI
QLFRGSIAENIARFGNIETAKVIAAAQMAGIHDLILHLPRGYDTQLGEGDEVLSGGQRQR
IALARAMYGVPRLIVLDEPNASLDKEGEKALLESILRLKQQGCTIVMITHKPELLSGSDY
LLLLNQGRMELFDRTEAVLRQVQGPDKPAVKTPVKVPASKKSWDSSMSYGVAPARTASQK
S
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgccatggaatcatataaaaacctctgagctaacgccgatcacggttctctctgtgctc
gctggacacaaaaaaatcctctggggaatcgggttattcaccgcagtaattaatattttg
atgttggctccggctatttacatgctgcaagtttatgatcgcgttctggtatcagccaat
accatgacattgctgatgctgacgattcttgtcctcggaatatttgtatttattggctta
cttgaatgggttcgtagtgcgatagttattcggctcggaactcgcattgatatgcaactt
aatcaacgggtatttaatgcagcatttgcatcccagcttcgcggacataaagcacctgcc
gcccaagctttgaatgatttaacatctttgcgccagtttgcgaccggcaatgccctgttt
gctttttttgatgccccctggtttccactgtatttgctggttatttttgtcctccatcct
tggttgggtgttttggccacggtaggcgcatgtgtgcttatttttctggcctggtttaac
cagtgggtatgtaaaaaacccttgaaagaagcatcaaccatcacttcccaagcaactcag
caagcgaatgccaatttacgtaatgccgacgccatcgaagcgatgggcatgctagatgca
ttgcgccagcgctggctcacgcaacattcacatttcctttatcaacaaaatatcgccagt
gacaaaagtagccaagtgaccgcagtatctaaatccagtcgccaagctttgcaatcaatg
atgcttgggctgggtgcattgctggttattgacggcgcaattacggcgggggtgatgatc
gcggggtcgattttaattggccgggtcttgagcccaattgatcagttaattgccgtctgg
aaacaatggagccaggcgcggctgtcttatcagcgccttgcccatttattggctgagcat
ccaccggtgcccgtggggatggttttgtctgcgccaacagggaaactcagtgtaacgcag
ctcactgtttgtcagcctggcactcataccccaattttatattccatcaactttgaacta
catcctggccatgttttgggtgttttggggccatcgggtagcggcaaatccacattggcg
aaactattggtggcgtgtaaaccggctttcagcggttcggtgcgcttggatagcgccaat
ttatctcaatgggacaaagcccatttgggggagtttattggctatctgccgcaagatatt
cagctatttcgtgggtcgattgcggaaaatatcgcccgttttggcaacatcgagacggca
aaagtgattgcggcggctcagatggcggggatacacgacttaatcctccatctgccacgg
ggttatgacactcagctcggcgagggggatgaggtgctttctggtggtcagcgccagcgt
attgctttggcccgggcgatgtatggtgtgccgcgccttattgtgttggatgagccgaat
gccagcttggacaaagaaggtgaaaaagcgttgttggaaagcattctgcgtcttaaacag
caggggtgcactatcgtgatgatcacccataagccggagctgttatcaggtagcgactac
ttattgctactcaatcaagggcggatggaattgtttgacagaaccgaagccgttttgcgg
caggttcaggggccggataagcccgcagttaaaacgccagtcaaagtgcctgcaagtaaa
aagtcttgggatagcagcatgtcctatggggttgccccagcccgtacagcatcacaaaaa
tcataa
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