Yersinia hibernica LC20: LC20_05148
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Entry
LC20_05148 CDS
T03179
Name
(GenBank) DNA-binding transcriptional regulator CytR
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
yel
Yersinia hibernica LC20
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yel03000
]
LC20_05148
Transcription factors [BR:
yel03000
]
Prokaryotic type
Helix-turn-helix
LacI family
LC20_05148
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
Peripla_BP_4
HTH_Tnp_ISL3
HTH_Crp_2
MarR_2
AIRS
TrmB
HTH_24
TetR_N
MerR
Motif
Other DBs
NCBI-ProteinID:
AHM76399
UniProt:
A0A7U4GIY5
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Position
4559174..4560202
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AA seq
342 aa
AA seq
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MEHKKEFTMATMKDVAEMAGVSTATVSRALMNPEKVSTVTRQKVEQAVLAVGYSPHALSR
NIKRNESRTILVIVPDISDPFFADIIQGIEHAAAEQDYLILIGDCAQQTQQERTFLNLII
TKQIDGMLLLGSNLPFDASKEEQRNLPPMVMANEFAPELELPTVHIDNLTAAYEAVNYLH
ELGHKRIACVAGPENFPLCQYRLQGYVQALRRNGIAVDSDYIIRGDFSYEAGAETFATLM
ELPHPPTAIFCHNDVMAIGAMWQAKKMGLRVPQDVSVVGFDDLKLSQYCDPPLTTVAQPR
YQIGQQAMLLLLEQLQGHSVQSGSRLLDTELIVRESTAAPKR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
ttggaacataagaaagaattcacgatggccaccatgaaagacgttgccgaaatggcgggt
gtttcaactgcaacggtatcgcgcgcattgatgaacccggaaaaggtgtcaaccgtgact
cggcaaaaagtggagcaagctgttctggctgtcggttactctccccatgctttatctcgc
aatattaaacgtaacgagtcgcgcactattttggttattgtgcctgatatcagcgacccg
ttttttgctgacatcatccagggcattgaacatgccgcagccgagcaagattatctaata
ttaattggtgattgcgcccaacaaacccagcaggagcgcactttccttaacctgatcatc
accaagcaaattgatggcatgttgctgctaggctctaatcttccttttgatgccagtaaa
gaagaacaacgcaatttgccgccgatggtgatggcaaatgagtttgctccggaactggag
ctgccgaccgtgcatatcgacaatctgaccgccgcctatgaggccgttaattatctgcat
gagttaggccacaaacgcattgcctgtgttgccgggccggagaattttccgctgtgtcaa
tatcggctacagggttatgttcaggcgctgcgccgtaatggtatcgcggttgacagtgac
tatattatccgcggcgattttagctatgaggctggcgccgaaacctttgcgacactgatg
gagttgcctcatccgccgaccgcaatattttgtcacaatgatgtgatggcgataggggcg
atgtggcaagccaagaaaatggggctccgcgtcccgcaggatgtctcggtcgtcggcttt
gacgacctgaaattgtcacagtattgtgatccacccttgaccactgtagcgcaaccacgt
tatcaaattggtcagcaagccatgttactattacttgagcagctacaagggcattcagta
caaagtggctcccgcttgttagacaccgaattaattgtcagggaaagtactgctgcgcct
aaacgctag
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