Yersinia hibernica LC20: LC20_05187
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Entry
LC20_05187 CDS
T03179
Name
(GenBank) 3-deoxy-D-manno-octulosonic acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
yel
Yersinia hibernica LC20
Pathway
yel00540
Lipopolysaccharide biosynthesis
yel01100
Metabolic pathways
Module
yel_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
LC20_05187
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
yel01005
]
LC20_05187
Enzymes [BR:
yel01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
LC20_05187
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
LC20_05187
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
LC20_05187
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
LC20_05187
Lipopolysaccharide biosynthesis proteins [BR:
yel01005
]
Lipid A
LC20_05187
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
Motif
Other DBs
NCBI-ProteinID:
AHM76438
UniProt:
A0A7U4GIZ4
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All DBs
Position
4596804..4598081
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AA seq
425 aa
AA seq
DB search
MLLRLYQVLLYLIQPLIWLRLLLRSRKAPAYRKRWGERYGFCAGKVAAGGIMLHSVSVGE
TLAAIPLVRALRHRYPSLPITVTTMTPTGSERVQSAFGKDVHHVYLPYDLPGSVNRFLDQ
VNPKLVIIMETELWPNLINALHRRKIPLVIANARLSARSAAGYKKIGSFIRNMLQRITLI
AAQNQEDGDRFIELGLRRSQLTVTGSLKFDISVTPELAARAVTLRRQWAPHRPVWIATST
HDGEETLLLEAHRQLLQHFPTLLLILVPRHPERFPKAIELTQKAGLSYTLRSKGEVPSAS
TQVVIGDTMGELMLLYGIADLAFVGGSLVERGGHNPLEAAAHAIPVLMGPHTFNFKDICA
KLEQAEGLITVTDTSSLVKEITMLLTDEDCRLYYGRHAVDVLHENQGALQRLLHLLEPYL
PQRSH
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgttactgcgtttataccaggtattactctaccttattcaacctctgatttggctacgg
ttgctgttgcgtagccgtaaagcccccgcttatcgcaagcgctggggggaacgctatggt
ttttgtgccggtaaagttgctgctggcggtatcatgctgcattcagtttcagtcggtgaa
acactggccgctattccattagtgagagcattacgccaccgctacccgtcactgcccatt
accgtgaccaccatgacccccaccggttctgagcgggtgcaatctgcttttggcaaagat
gttcaccatgtgtatctgccctatgacctccccggctcagtgaaccgttttcttgatcaa
gttaatcccaagctggtcattatcatggaaactgaactatggccaaacctaatcaatgca
ctgcatcggcgcaaaattcctttagtcattgccaatgcgcgcctttcggcccgctctgcc
gctggctataaaaaaatcggtagttttattcgcaatatgctgcaacgaatcacactgatt
gccgcgcaaaatcaagaagatggcgaccgtttcattgaattaggcctcagacgttcacag
ctgacggtaactggcagcttgaaatttgatatttctgtcacacctgaattagccgccaga
gccgtgacattacgtcgtcagtgggcaccacatcggccagtctggatagcgaccagcact
catgacggcgaagaaacgctcttactggaagcccatcgccaattattacaacatttccca
acgctgctgctgattctggtgcctcggcatccagaacgtttcccgaaagcgattgaatta
acacaaaaagcagggctgagttacacattgcgcagcaaaggcgaagtcccttcagccagc
acccaggtggtgattggcgataccatgggcgaattgatgctgctgtacggcattgccgat
ttagcctttgtgggcggcagcttggttgagcgcggcggtcataacccactcgaggcggca
gctcatgctatccccgtattgatggggccacacacatttaacttcaaagatatttgtgcc
aagctggaacaagcggaggggttgattaccgtcaccgatacctcgtcactggtgaaagaa
atcaccatgctgctgactgatgaagattgccgcctctattatggccgccatgcagtggat
gtattgcatgaaaatcagggcgcattgcaacggttattgcacttgctggagccttatcta
ccgcaacggagccactaa
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