Yersinia hibernica LC20: LC20_05225
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Entry
LC20_05225 CDS
T03179
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
yel
Yersinia hibernica LC20
Pathway
yel03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LC20_05225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yel03021
]
LC20_05225
03400 DNA repair and recombination proteins [BR:
yel03400
]
LC20_05225
Enzymes [BR:
yel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LC20_05225
Transcription machinery [BR:
yel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LC20_05225
DNA repair and recombination proteins [BR:
yel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LC20_05225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
AmiR_N
DUF1599
Motif
Other DBs
NCBI-ProteinID:
AHM76476
UniProt:
A0A7U4GJ18
LinkDB
All DBs
Position
4629264..4629539
Genome browser
AA seq
91 aa
AA seq
DB search
MARVTVQDAVEKIGNRFDLVLVAARRARQIQSGGKDALVPEENDKVTVIALREIEEGLIT
NQILDVRERQEQQEQEAAEIQAVTAIAEGRR
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgtaactgttcaagacgctgtagagaaaattggtaaccgttttgacctggtg
ttggtcgctgctcgtcgggcacgtcaaatccagtccggcggtaaagacgcactggttcca
gaagaaaacgataaagtgactgtgatcgcgctgcgcgaaatcgaagaaggcctgattact
aatcagattctcgatgtgcgtgaacgccaagaacagcaagagcaggaagccgcagagatt
caagcggtaaccgcgattgctgaaggtcgtcgttaa
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