Yersinia hibernica LC20: LC20_06085
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Entry
LC20_06085 CDS
T03179
Symbol
ltrA
Name
(GenBank) group II intron reverse transcriptase/maturase
KO
K00986
RNA-directed DNA polymerase [EC:
2.7.7.49
]
Organism
yel
Yersinia hibernica LC20
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
LC20_06085 (ltrA)
Enzymes [BR:
yel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.49 RNA-directed DNA polymerase
LC20_06085 (ltrA)
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Gene cluster
GFIT
Motif
Pfam:
RVT_1
RVT_N
GIIM
HNH
Motif
Other DBs
NCBI-ProteinID:
AHM76657
UniProt:
A0A7U4GBX5
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Position
plasmid1_80K:55803..57512
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AA seq
569 aa
AA seq
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MTAQLNSSGAPSDQATHWHSIDWARCHREVRRLQARIVKATQEGRHGRVKALQWLLTHSF
SGKALAVKRVTENRGKRTSGVDGVTWSTPKIKLKAVLSLRRRGYRPQPLRRIYIPKANGK
QRALGIPCMIDRAQQALHLLALEPIAETTADPNSYGFRSARSTADAIEQCFKALSHTDCA
EWILEADIRSCFDEISHNWLIANIPMDKAILRMWLKAGYFHHNVLYPTAAGTPQGGIISP
TLMNMTLDGLEHLLRLKYRRSTRNPSKVNIVRYADDFIITGVTREMLAEEVIPMVEQFLA
ERGLSMSPEKTRITHISDGFDFLGMNVRKYGGKLLIKPAATSVQRFLRKVREVIKGNAMV
RHDILIRRLNPMLRGWANYNQHVVTKQTFRKISYAIWLSLWRWTKRRHPHKGAGWIRRKY
FRTIGARHWVFATKTGKILKTGVPELLELYDIVSTPIRRHRKIRAEANPFDPKWETYFEE
RLALAMQGSIKGRTRLIRIWLAQERNCPVCRQMIGESTGWRLYHMERKIDGGRDTNSNLM
LLHPDCYQIARARRFKVVKPAPSVGLRKA
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgcagctaaatagctctggtgcaccctccgatcaggcgacgcactggcacagt
attgactgggcaagatgccaccgcgaggtcagaaggcttcaggcacgtatcgtgaaggca
acacaggaaggcagacatggcagagtgaaagctctgcaatggctgctcacccactcgttc
agcggcaaagctctcgccgttaagcgagtgacagagaatcgcggcaaacgaacttctggc
gtagatggggttacgtggtctacgccgaagatcaagctcaaagcagtattatcactcagg
cgacggggctatcgtcctcagccactgaggcggatttacatccccaaagccaacgggaag
cagcgggcactgggcattccctgcatgatcgacagggcgcagcaggcactacacttgctc
gcgctggaaccgatagccgaaacaaccgcagacccgaactcatatgggttcaggtctgcc
cggtcaacggctgatgcaattgaacagtgtttcaaggctctttcacacaccgattgtgcg
gaatggatccttgaagctgacatccgtagctgctttgacgaaatatcgcacaactggctg
atcgccaatatcccgatggacaaggcgatcttacgaatgtggctgaaagctggctacttt
caccataatgtcctttatccaacagcggcgggcaccccccaaggggggatcatatcgcca
acgttgatgaatatgactctagatggattagaacacctgctacgacttaaatatcgcagg
agtacccgcaatccgtcgaaggtcaatatcgttcgatatgcggacgacttcatcataacc
ggtgtgactcgtgaaatgctggcagaagaagttatccctatggtcgagcagtttctggcg
gagcggggtctctcgatgtcgccagaaaagaccaggatcacgcatatcagcgatggattc
gacttcctcggcatgaacgtacgcaaatatgggggcaaattgttaatcaaacccgccgct
accagcgttcaacgttttctgcgcaaagtaagggaagtgatcaagggcaatgcaatggtg
cggcacgatatactgatacgaaggctcaacccgatgcttcgtggatgggccaattacaat
cagcatgttgtgacgaaacagacgttcaggaaaatcagttatgcgatatggctaagcctg
tggcgttggacaaaacgtcggcatccccacaagggcgcaggatggatccggcggaaatac
ttccggaccatcggagcccgacactgggtctttgccacaaaaaccggcaagatactcaaa
accggagtccccgagcttctggaactttacgacattgtcagcacaccgatcaggcggcac
aggaaaatccgcgccgaggctaatccctttgatcctaaatgggaaacctacttcgaagag
cgattggctcttgctatgcaaggctcaattaaggggcgaacccggctgattcggatatgg
ttagctcaggaacgaaattgccctgtctgccgacagatgatcggtgaatctactggatgg
cgtctctaccacatggaacgaaagatcgatggtgggcgagataccaacagtaacctgatg
ctgctgcatccggactgctaccagatagcacgcgcacgcagattcaaagttgtgaaaccg
gctccttcagtggggcttagaaaggcttga
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