KEGG   Yersinia hibernica LC20: LC20_06775
Entry
LC20_06775        CDS       T03179                                 
Symbol
gspD
Name
(GenBank) type II secretion system protein GspD
  KO
K02453  general secretion pathway protein D
Organism
yel  Yersinia hibernica LC20
Pathway
yel03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:yel00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LC20_06775 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:yel02044]
    LC20_06775 (gspD)
Secretion system [BR:yel02044]
 Type II secretion system
  General secretion pathway protein
   LC20_06775 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: ATX62736
UniProt: A0A7U5PGH3
LinkDB
Position
complement(847349..849346)
AA seq 665 aa
MYCNNKIKLIYIKFFTSFIRFKYFYIYLFGVMIITTILPMKSLNASANFSASFRDVDIKE
FIHTVSKNINKTIIIDPKVQGLVSVRSYEQLDEEKYYQFFLNVLDVYGYTVVEMPNNILK
VIPAKRAKSSVVPLQKDDGATHGDELINRVFKLKYILAKNLAPLLRQLNDNSESGSIAHY
DPSNVILITGRAAVVNRLYAIINTLDQPGDNEVELYQLNHAVAADIIKLVNQVINPVNMT
EKSESFNIVKVIADDRTNSILISGDLHARKRAIQMIKRLDHQQDSYGSTKVIYMKYAQAS
KLLDVLNGVSLWGQSDKTKKMVGKSNITNMSIKAYDQTNALVITAHPKLMKELDQIIEKL
DIRRAQVLVEAIIVETHNGEGLNLGIQWANKLHGSVNFLQKLDSRSENDNIKNSIPMAIA
GLTAGFYKGNWNGLFTALATNSNNNILATPSIVTLDNMEAEFNVGQEVPVLTSTQTTATD
KVYNSISRQSVGVMLKVKPQINKGDSVLLEIRQEVSSVADGSDVNANSLGSVFNKRVVNN
AVLVKSGETVVVGGLLDKKISKVINKLPFLGDIPLIGGLFRQSKEKVEKSNLILFIRPTI
LRDTGDYSQVTADKYTEHSNLNSLNSDITRPIEIVSNKINNDAFNTLKNDIVNFYQRVGV
NYDSR
NT seq 1998 nt   +upstreamnt  +downstreamnt
atgtattgcaataataaaataaagttaatatacattaaatttttcacttcttttatcaga
tttaaatatttttatatctatttatttggagtgatgattataacaactatcttaccgatg
aagtcacttaatgctagcgcgaatttttctgcatctttcagagatgtggatataaaggag
tttatccatactgtaagtaaaaacatcaataaaactataattatagaccctaaagtccaa
gggttagtcagtgttcgtagctatgagcagttagacgaagaaaaatactatcaattcttt
ttaaatgtacttgacgtttatggctatacagtggttgaaatgcctaataatatcttaaag
gttataccggcgaagcgtgcaaaaagttcggttgttcctttacaaaaggatgacggcgca
acccatggtgacgaacttattaaccgcgtatttaaacttaaatatatattagcaaaaaac
ttggcaccattacttcgtcagctcaacgataactctgaatcgggtagcattgcccattat
gacccctcaaatgtaatattaataactggacgtgcagcagtagtaaatcggttatatgcc
attattaatacattagaccagccaggagataatgaagttgaactctatcaactgaatcat
gcggtggctgcagatattattaaattagtcaatcaagtcataaatccagtaaatatgacg
gaaaaatcagagtcatttaatattgtgaaagtaattgcagatgaccgaactaattcaatt
ttaattagtggcgatctccatgctagaaaaagagcgattcaaatgataaagaggcttgac
catcaacaggacagttatggaagcactaaagtcatttatatgaaatatgctcaggcatca
aagctactagatgttttaaatggtgtcagcctctgggggcaaagcgataaaactaaaaaa
atggtagggaagagtaacatcacgaatatgtcgattaaggcatacgaccaaacaaatgct
ctagttattacagcgcatccaaagctaatgaaagagttagaccagattattgaaaagcta
gatataagacgtgcgcaggtattagtggaggcaattatagtagaaacccataatggagag
ggactaaatcttggtatccagtgggctaataaactgcatggtagcgttaattttcttcag
aaattagatagtcgaagcgagaatgataatattaaaaactcgataccaatggcgattgct
ggattaaccgcaggtttttataaaggaaattggaatggcctatttactgcattggctact
aattcaaataacaatattttggcaactccgagcattgttacgttagataacatggaggcg
gaatttaatgttggacaagaggttcccgtattaacttcgacgcaaacaacagcaacagac
aaggtatataattctatttcaagacaatccgtaggtgtcatgttaaaggttaagccacag
ataaataaaggcgattccgtcctgttggaaattcggcaagaggtatcaagtgtagccgat
ggttcagatgttaatgctaacagtctgggttcggtttttaataagagagttgttaataat
gccgtattggttaaaagtggagaaacagtcgtcgtgggtgggttgctagataagaaaatt
agtaaggtaataaataagttgccatttctaggcgatatccctttgatcggtggcttattt
aggcaaagtaaagaaaaggttgaaaaaagtaatttaattctctttattcggccaacaata
cttagagatacaggtgactatagccaagtgacagcagataaatatacagaacatagtaac
ctgaattctcttaattctgacataacacgtccaattgaaatagtatcgaataaaataaat
aatgatgcttttaatacgcttaaaaatgacatagtaaatttttatcaacgagtaggagta
aattatgactcaagataa

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