Yersinia enterocolitica subsp. enterocolitica 8081 (serotype 0 8): YE0192
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Entry
YE0192 CDS
T00469
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
yen
Yersinia enterocolitica subsp. enterocolitica 8081 (serotype 0:8)
Pathway
yen00300
Lysine biosynthesis
yen00470
D-Amino acid metabolism
yen01100
Metabolic pathways
yen01110
Biosynthesis of secondary metabolites
yen01120
Microbial metabolism in diverse environments
yen01230
Biosynthesis of amino acids
Module
yen_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
yen00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
YE0192 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
YE0192 (dapF)
Enzymes [BR:
yen01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
YE0192 (dapF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
CAL10328
UniProt:
A1JI90
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All DBs
Position
227252..228076
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AA seq
274 aa
AA seq
DB search
MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHTGVGFDQMLVVEPPYDPELDFHY
RIFNADGSEVSQCGNGARCFARFVRLKGLTNKRDISVSTQTGRMILSVTEDELVCVNMGE
PNFEPQSVPFRAAKAEKTYILRAAEHTVLCGVVSMGNPHCVMQVDDVSVANVALLGPVLE
SHERFPERANIGFMQVVSREHIRLRVYERGAGETQACGSGACAAVAVGIQQELLGEEVHV
ELPGGSLHISWKGPGHPLYMTGPATHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctccaaaatgcacggtcttggcaacgactttatggttgtcgatgcagttacc
caaaatgtttacttttcgccggagttgatccgccgattagcagaccggcacactggcgtg
ggctttgatcaaatgttggtggttgagccaccttatgatcctgagctggattttcactac
cgtatttttaatgccgatggcagcgaagtctctcagtgtggcaatggcgcgcgctgtttt
gcccgttttgtccgactgaaagggctgaccaataaacgcgatatcagtgtcagcactcaa
accggtcgtatgatattgagtgtgactgaagacgaactggtgtgcgtcaatatgggcgaa
cccaatttcgaaccgcagagtgttcctttccgtgcggctaaagctgaaaaaacctatatt
ttacgtgccgccgagcacaccgtgttatgtggtgtcgtttcgatgggcaatcctcattgt
gtgatgcaggttgatgatgtttcggttgccaatgttgccttgctaggcccagtattagaa
agccatgagcgctttcccgaacgggctaatattggctttatgcaggttgtgagccgtgaa
catatccgcttgcgggtgtatgagcgcggagccggtgaaactcaggcttgtggtagcggg
gcttgtgcggccgtggcggttggtattcagcaagaattgttgggtgaagaggtgcatgtt
gaattgccgggtggcagtttgcatatcagttggaaagggccgggtcacccgctgtatatg
accgggccagccacccatgtgtatgacggatttattcatttatag
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