Yersinia enterocolitica subsp. enterocolitica 8081 (serotype 0 8): YE0196
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Entry
YE0196 CDS
T00469
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
yen
Yersinia enterocolitica subsp. enterocolitica 8081 (serotype 0:8)
Pathway
yen03420
Nucleotide excision repair
yen03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
yen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
YE0196 (uvrD)
03430 Mismatch repair
YE0196 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yen03400
]
YE0196 (uvrD)
Enzymes [BR:
yen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
YE0196 (uvrD)
DNA repair and recombination proteins [BR:
yen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
YE0196 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
YE0196 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
PhoH
AAA_11
Motif
Other DBs
NCBI-ProteinID:
CAL10332
UniProt:
A1JI94
LinkDB
All DBs
Position
230599..232761
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSDLLDSLNEKQREAVAAPRCNLLVLAGAGSGKTRVLVHRIAWLLSVENASPYSIIAV
TFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHMDANLPQDFQILDSDDQL
RLLKRLVKALNLDEKQWPPRQAMWYINGKKDEGLRPQHIESYGNPVEATWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNILVDEFQDTNNIQYAWIRLLAGDR
SNVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAETIRLEQNYRSTSNILTAANTLIANN
DGRMGKNLWTDGAQGEPISLYCAFNELDEARFVVNRIKAWQDNGGALNDCAILYRSNAQS
RVLEEALLQTAMPYRIYGGQRFFERQEIKDALAYLRLISNRNDDAAFERVVNTPTRGIGD
RTLDVIRQTARDRQLTLWQSTRAMLQEKVLAGRAASALQRFVELVDSLAHETADMPLHVQ
TDRVIRDSGLWSMYEQEKGEKGQARVENLEELVNATRQYSYQDEDQDLMPLQAFLSHAAL
EAGEGQADAYQDAVQLMTIHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLCYAESRRLYGKEVNHRPSRFIGELPQECVEEVRLRATVSRPVNHRRMG
TPMNENDSGFSLGQRVRHPKFGEGTIVNLEGSGEHSRLQVAFPGEGIKWLVAAYARLEAV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgatctgctcgacagcctgaatgaaaaacaacgtgaagccgtggccgcg
ccacgctgcaacctgttggtactggccggtgcgggcagtggcaaaacacgggtgctggtt
catcgtattgcctggctgttgtcggtagaaaatgcttccccgtattcgattatcgcggtg
acctttaccaataaagcggcagccgaaatgcgccaccgtattgagcatttgattggcacc
agtcagggcggcatgtggattggtactttccacgggttggcgcaccggttgttgcgtgct
caccatatggatgccaatctgccgcaagatttccaaatcctcgacagtgacgaccaacta
cggttattgaaacgcttggttaaagccttgaatttagatgaaaaacaatggcctccacgt
caggcaatgtggtacatcaacggcaaaaaagacgaaggtctacgtccgcagcatattgag
agctacggtaacccggttgaagccacttggttgcgtatttatcaggcctatcaggaagcc
tgtgaccgcgcgggcctggtggattttgccgagctattattgcgtgcgcatgagctgtgg
ctaaataagccgcacattctgaatcactatcgcgagcgctttaccaacattctggtggat
gagttccaggataccaacaacattcaatatgcctggattcgcctgctggcgggggatcgc
tccaatgtgatgattgtcggtgacgatgaccagtcaatttatggttggcgcggggcgcag
gtggagaatatccagcgcttcctgaaagattttcccggcgctgaaaccatccgattggag
cagaattatcgttcgaccagcaatattctgacggcggcaaacaccctgattgctaataat
gatggccgcatgggtaagaacttgtggactgatggggcgcaaggcgagcctatctcgctc
tattgtgcctttaacgagttggatgaagcccggtttgtggtgaatcgcattaaagcctgg
caagacaacggcggtgcgctgaatgattgcgccatcttgtatcgtagtaatgcccaatcg
cgtgttttggaagaggccttgttacaaacggcgatgccgtaccgtatttatggtggtcag
cgcttcttcgaacgtcaggaaatcaaagacgcactggcttatctacgtctgatttccaat
cgtaacgatgatgctgcttttgagcgggtggtgaatacgccgactcgtgggattggtgat
cgcacattagatgtgattcgccaaaccgcgcgtgaccgtcagttaaccttgtggcagtca
acccgtgccatgttgcaggaaaaagtgctggcaggccgtgcggcttctgcgctgcaacgt
tttgtcgaactggtggattcactggcgcatgaaacagctgatatgccgctgcatgtccaa
actgatcgagtaattcgcgattctggcttgtggtcgatgtatgagcaggaaaagggcgaa
aaaggtcaggcgcgtgttgaaaaccttgaagaactggtcaatgcgacccgccaatacagc
tatcaggatgaagatcaggatctgatgccactacaggcatttctttctcatgcggcgctg
gaagccggtgaggggcaagcagatgcctatcaggatgcagtgcaactgatgactatccat
tcagcaaaagggttggagttcccgcaggtatttatcgtgggtatggaagagggcatgttc
cccagtcagatgtcactggatgaaggtgggcgtctggaagaagaacggcggctggcctat
gttggggtcacgcgcgcgatgcagaaactgacactctgttatgccgagagccgccgtttg
tacggcaaagaagtgaatcatcggccatcacgttttatcggcgaattgccgcaagagtgc
gtcgaagaagtgcggctacgcgcgacggtctctcgcccggtaaaccaccgtagaatgggg
acgccaatgaacgaaaatgacagcggtttctcactgggccagcgggtgcgacatcctaag
tttggtgaaggcactatcgtcaatttggaaggcagcggtgagcacagtcgcttgcaagta
gccttccccggtgaagggattaagtggttggtggcggcttatgccagactagaagccgtc
taa
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