Yersinia enterocolitica subsp. enterocolitica 8081 (serotype 0 8): YE1080
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Entry
YE1080 CDS
T00469
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
yen
Yersinia enterocolitica subsp. enterocolitica 8081 (serotype 0:8)
Pathway
yen03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
yen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
YE1080 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yen03400
]
YE1080 (xseA)
Enzymes [BR:
yen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
YE1080 (xseA)
DNA repair and recombination proteins [BR:
yen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
YE1080 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CAL11177
UniProt:
A1JKT0
LinkDB
All DBs
Position
complement(1208595..1209971)
Genome browser
AA seq
458 aa
AA seq
DB search
MSQSSASSIFTVSRLNQTVRQLLEMEMGQIWLTAEISNFSQPSSGHWYFTLKDDRAQVRC
AMFRNTNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQQ
LAAEGLFDQSHKQPLPSPAKQVGVITSSSGAALHDVLQVLQRRDPSLPVIIYPTAVQGAD
APLQIVRAIQLANLRGECDVLIVGRGGGSLEDLWSFNDERVARAIFNSRIPIVSAVGHET
DVTIADFVADLRAPTPSAAAELVSRNQIELVRQIQGQQQRMEMAMDYYLAQRHQQLTRLE
HRLQQQHPHLRLARQQTLLLKLQRRLEDSAQNQIRRLSRRTERLQQRLVQAQPQGQIHRY
NQRVQQQEYRLRQALERQLNGYRQRFGIACSQLEAVSPLATLARGYSVTQTPEGSLLKTT
KQVHTGDKLTTRLQDGWVESEITQIKVAKKPRQRKAAN
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaatcttccgcgtcatcaatttttactgtcagccgccttaatcagacggtgcga
caactgctggaaatggaaatgggccaaatttggctcactgccgagatttccaatttctct
cagccttcgtcgggtcactggtatttcaccttaaaagacgatcgggcgcaggtgcgctgc
gcgatgtttcgtaacaccaatcgtcgaaccacttttcgcccacaaaatggccaacaagtg
ttggtcagagcatcgattaccctgtatgaaccgcgtggtgactaccaattaattgccgaa
agcatgcaacctgctggcgacggattgctgcaacagcaatttgaacagcttaaacagcaa
ctggccgctgaagggcttttcgaccaaagccacaagcaacctctgcccagcccagccaaa
caggtgggggtgataacttcatccagtggtgctgctctgcacgatgttttacaagttttg
cagcgccgtgacccttcacttccggttattatttatccgacagcagtgcaaggtgctgat
gctccattgcagatagtccgagccattcaactggcaaatctgcggggggaatgtgatgta
ttgattgtcgggagaggtggcggctcgttggaagacttgtggagttttaatgacgagcgg
gttgcccgcgctatttttaatagcaggattcccattgtcagtgcggtcggccatgaaact
gatgtcactatcgcggacttcgttgccgatttacgcgccccaaccccatcagccgccgcc
gagctggtcagccgcaaccaaatagagttggttcggcaaattcaggggcagcagcagcgc
atggaaatggcgatggattattatctggcgcagcgccatcagcaactcacccgccttgag
catcggctgcaacagcaacacccgcatttgcgattggcccgtcagcaaacactgctgttg
aaattacaacgccgactggaagatagcgcgcaaaaccaaattcgccgattaagtcgacgc
actgaacggctgcaacaacggctggttcaagctcaaccgcaagggcagatccatcgttat
aatcagcgggtacaacagcaggagtaccgcttgcgtcaggcattagagcgccagttgaat
ggctatcgtcagcgttttggcatcgcctgctcacaattggaagcggtcagcccattggct
acactagcccgcggctacagcgtaacgcagaccccagagggcagcttactcaaaaccacg
aaacaagtgcatactggcgacaagctaaccacccgactgcaagatggctgggtggaaagt
gaaatcactcaaatcaaggtggcaaaaaagccccgtcagcgtaaagccgctaactga
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