Yersinia enterocolitica subsp. enterocolitica 8081 (serotype 0 8): YE1423
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Entry
YE1423 CDS
T00469
Name
(GenBank) putative DEAD box helicase family protein
KO
K19789
DNA repair protein RadD
Organism
yen
Yersinia enterocolitica subsp. enterocolitica 8081 (serotype 0:8)
Brite
KEGG Orthology (KO) [BR:
yen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yen03400
]
YE1423
DNA repair and recombination proteins [BR:
yen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
YE1423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
DUF7577
SWI2_SNF2
AAA_30
Zn_ribbon_3
zf-tcix
AAA_16
SLFN-g3_helicase
AAA_22
AAA
DZR
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
CAL11513
UniProt:
A1JLN3
LinkDB
All DBs
Position
complement(1595855..1597612)
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AA seq
585 aa
AA seq
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MAFTLRPYQQEAVDATLAHFRRHAEPALIVLPTGAGKSLVIAELAKLARGRVLVLAHVKE
LVAQNHAKYCAYGLEADIFAAGLQQRQSEGKVVFGSVQSVARNLSLFDSAFSLLIIDECH
RISDKDDSQYQQIIQHLRTTNPRLRLLGLTATPYRLGKGWIYQFHYHGITRGDEKSLFRD
CIYELPLRYMIKHGFLVPPERLDMPVVQYDFSRLTSNSDGMFREADLDRELKQQQRITPH
IVSQIMEYAAHRRGVMIFAATVEHAKEVYGLLPKGEAALVSAGTPPAERDALITAFKQQQ
LRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPGKEDCLILDYAGNP
HDLFAPEVGTSKPHGDSQPVQVFCPDCGFANIFWGKCTESGEIIEHYGRRCQGWFEDDQG
ARAQCDYRFRFKSCPHCGAENDIAARRCHQCQEVLVDPDDMLKAALKLKDALVLRCGGMS
LEAGQDAKGEWLKITYYDEEGTNTSERFRLTTAAQRMAFEQIFLRPHQRAPGIALKWQTA
ADIIAQQALLRYPDFVVARRRGQWWQIREKVFDYQGRFRRADSLA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcctttacgttacgcccttatcaacaagaagcggtagatgcgaccctcgctcatttt
cgccgccatgccgaaccagcactcattgtcttacccactggcgcgggtaaaagtctggtt
attgctgaattagccaaactggcgcgcgggcgcgttttagtgctggcgcatgtcaaagaa
ctggtggcgcagaatcacgccaaatattgtgcttatggtttagaggctgatatttttgcc
gcaggcctgcaacaacgccaaagtgaagggaaagtggtttttggtagcgtacaatccgtg
gcgcgaaacctgtctctatttgatagtgccttttcactgctgataattgatgaatgtcat
cgaatcagcgataaagatgacagccaatatcagcaaattattcagcatttacgtaccacc
aacccacgcctgcgcttattggggctgactgccaccccctaccgcttgggtaaaggctgg
atctatcaattccactatcacggtatcacccgtggtgatgaaaaatccctgttccgcgat
tgtatttatgaattacccctgcgttatatgattaagcacggctttctggtaccaccggaa
cggctggatatgcccgtcgtacaatatgatttcagccgcttgaccagcaatagcgacggt
atgttccgtgaagcggatttagaccgcgagcttaagcagcagcaaagaattaccccacat
attgtcagtcagataatggagtatgccgcccatcgacgaggggtgatgattttcgccgcc
accgttgagcatgccaaagaggtctatgggctgttgcctaaaggtgaggctgcgctggta
agtgccggaacgccgccagccgaacgggatgcgttaattaccgcgtttaaacagcagcaa
ttgcgctatttggtgaatgtcgcggtgctgaccaccggttttgatgccccgcatgtcgat
ctgattgccattcttcgcccgaccgagtcagttagtttgtatcagcaaattgtcgggcgc
gggctgcggctctctccgggcaaagaagattgcctgattctggattatgccggtaacccc
catgaccttttcgctccggaagtgggtaccagcaaaccccacggtgacagccagccagtg
caggtcttttgcccggactgcggctttgccaatatcttctgggggaaatgcactgagtcc
ggcgagattattgaacactatggccgccgctgccaaggctggtttgaagatgatcaaggt
gcacgagcacaatgtgattaccgcttccgcttcaaatcctgcccacattgtggtgcagaa
aatgatattgctgctcgccgctgccatcagtgtcaggaggtgctggtcgatcccgatgac
atgctcaaagctgcgttgaaattaaaggatgcgctggtactgcgttgtggcggaatgagc
ctggaagcgggtcaggatgcaaaaggtgagtggctaaaaatcacctattacgacgaagag
ggtaccaataccagtgagcgatttcgcttaaccactgccgcacaacgaatggcattcgag
caaattttccttcgtccgcaccaacgggctccgggtattgcgcttaaatggcaaactgcc
gcagatatcatcgcccagcaagcgctattgcgttatcccgattttgttgtcgcccgccgt
cgcgggcaatggtggcaaatcagggaaaaggtttttgattatcagggccgttttagacgc
gctgattccctcgcctaa
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